Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03785 ATGCGGTGGTTATCTACGCTTTCCTTCACGCATTCCTGTTCCTCCTCGTCTTCCTCAGCTGCCGCCGCCGACCACCGCCGGAAGGCCTGGCTGTTCGGTAGTTCGTCCAAGAAACGCGCCTGCCATGGCGAGAACGATGCCAGGTGGCACGAGGACGATTCACCATTCTCTTCCCCCGGCACACCTCAGCCCTTGCCCCTGCCGGAGCTCGCCTCCTCCTCCGCCTTGATCCGCAACAGAGACGGCAAATGCCGTCTTCCCTCGCCCAAGGAGGCTGCTACAGCCACCACCTACACCGGCTGTCGGATGCGGAGTGCTTTTGCTGGCCAAGACACGAGAAGGAGTATGGAACAGGCTGAAACCAGGTCATCGAGAATGGTGCATCAAGATGCGTGTGGTTGTTGTGAAAGTGCTCGAGATAATAGTAATACTAATAATAGTAACTTGGCGAGCATCCCTCGTAGGAGCAGTTTTTCAAGTATTCCCTTTGCAAGTCCTTCAATATTGAGTCCAAAGAAAACAAAAAATGGCGAATCTGTGCCATATTATTATGCGAGTCCCAGAGGAAATCAGTTCTGGTCTGCACCAGAAATGTCTACCTGTGAAACAGGGTTGCCACCTCCCGCCTTCTTTGATTTATCCGTGTTGAGCACAGAAGCTTCTCCCTCTCCCACCTCCCATCCAAGTCCACAGAGGAGAAGTCCCGGGCACCACACCAAAACCTTGAGTGGACCTCTATCTCCTATACATTCCAAGTTATCACTTGAAATCTCAATGGTGCGCCGTGAAAGCACTGCCCCTCCTGTCAGTGTTCACCCCTTGCCCCTGCCTCCTGGGGCTCCCCTGCCCTCTCCATCGTCAGCTAGTACATTTTCCAATGCTAGAGCAGAATCATTGCCAATGAAAAACCAATGGCAAAAAGGGAAACTTATCGGGCGTGGGACATTTGGAAGTGTTTATGTTGCAACCAATAGGGAAACCGGTGCATTATGTGCAATGAAGGAAGTGGAAATGTTTCCTGATGATCCAAAATCTGCTGAGTGTATAAAACAGTTAGAGCAGGAAATTAAAGTTCTTAGCCATCTACAGCATTCGAACATCGTGCAGTATTTTGGCAGTGAAACAGTTGAGGGCCGGTTTTATATTTATCTGGAATATGTTCATCCTGGTTCAATTAATAAATACGTCCGTGAACATTGTGGTGCCATAACAGAATCTGTCATTCGGAATTTCACTCGACATATTCTATCAGGATTGGCTTATTTACATAGCAAAAAAACAATTCATAGGGACATCAAAGGGGCTAACTTGCTTGTTGACTCCGCTGGAGTTGTTAAGCTTGCTGATTTTGGGATGGCTAAGCATCTAAATGGGTTCGAAGCTAATCTTTCTTTGAGGGGAAGTCCGTACTGGATGGCTCCAGAGCTTTTGCAGGCGGTGATGCAAAAGGATAACAACCCTGATCTTGCTTTTGCTATTGATATTTGGAGTCTGGGTTGTACCATTATTGAAATGTTCACAGGGAAGCCTCCTTGGAGTGAATATGAAGGAGCCGCAGCTCTGTTTAAGGTTATGAAGGAAACCCCTCCTATTCCTGAAACATTGTCACCCGAGGGTAAAGATTTCTTGAGGTGCTGCTTTAAAAGGAATCCAGCAGAGCGGCCAGCAGCTGCAGTTTTACTAGAACATCGATTTTTGAAAAACTCTCAACAGCTTGATGTTTCATCTCCCACTCAGTTGTATAATGGAACAGGCTTCATGGACAAACCACGTAGTCCCATTAAACAATTTGAATATAAACATGACCAGTTGTCAATCTCCTGTGCCAAAATTGCCAAGGTTAAAGCAGCTGACAGGCGTGGATTTCGGATTTCGTCGTTGGAAATTCTTCCTGCATCCTTTAACCAATAA 1911 0.4715 MRWLSTLSFTHSCSSSSSSAAAADHRRKAWLFGSSSKKRACHGENDARWHEDDSPFSSPGTPQPLPLPELASSSALIRNRDGKCRLPSPKEAATATTYTGCRMRSAFAGQDTRRSMEQAETRSSRMVHQDACGCCESARDNSNTNNSNLASIPRRSSFSSIPFASPSILSPKKTKNGESVPYYYASPRGNQFWSAPEMSTCETGLPPPAFFDLSVLSTEASPSPTSHPSPQRRSPGHHTKTLSGPLSPIHSKLSLEISMVRRESTAPPVSVHPLPLPPGAPLPSPSSASTFSNARAESLPMKNQWQKGKLIGRGTFGSVYVATNRETGALCAMKEVEMFPDDPKSAECIKQLEQEIKVLSHLQHSNIVQYFGSETVEGRFYIYLEYVHPGSINKYVREHCGAITESVIRNFTRHILSGLAYLHSKKTIHRDIKGANLLVDSAGVVKLADFGMAKHLNGFEANLSLRGSPYWMAPELLQAVMQKDNNPDLAFAIDIWSLGCTIIEMFTGKPPWSEYEGAAALFKVMKETPPIPETLSPEGKDFLRCCFKRNPAERPAAAVLLEHRFLKNSQQLDVSSPTQLYNGTGFMDKPRSPIKQFEYKHDQLSISCAKIAKVKAADRRGFRISSLEILPASFNQ 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03785 636 FunFam Mitogen-activated protein kinase kinase kinase 5 302 603 - -
Viun3g03785 636 MobiDBLite consensus disorder prediction 270 284 - -
Viun3g03785 636 Pfam Protein kinase domain 306 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g03785 636 MobiDBLite consensus disorder prediction 218 248 - -
Viun3g03785 636 ProSiteProfiles Protein kinase domain profile. 305 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g03785 636 SMART serkin_6 305 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g03785 636 MobiDBLite consensus disorder prediction 264 291 - -
Viun3g03785 636 ProSitePatterns Protein kinases ATP-binding region signature. 311 334 IPR017441 GO:0005524
Viun3g03785 636 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 29 579 - -
Viun3g03785 636 Gene3D Transferase(Phosphotransferase) domain 1 301 591 - -
Viun3g03785 636 SUPERFAMILY Protein kinase-like (PK-like) 298 584 IPR011009 -
Viun3g03785 636 MobiDBLite consensus disorder prediction 43 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03785 Viun-Chr3 45021942 45027264 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03785 146 604 MAP Kinase Kinase Kinase AT5G66850 63.450 0.0 598
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Viun3g03785 Pkinase 1.4e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03785 - - gmx:100790701 926.776