Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun3g03779 | ATGGATCGGGCGGCGTTGACGGTCGGACCGGGCATGGACATGCCGATCATGCACGACAGTGACCGTTACGATCTGGTCCGTGACATCGGGTCCGGAAATTTCGGCGTGGCCAGGCTGATGCAGGATAAACAGACCAAGGAACTCGTTGCCGTCAAGTACATCGAGAGGGGCGATAAGATTGATGAAAATGTGAAGAGGGAAATTATTAACCATAGGTCTTTGAGACATCCCAATATTGTTAGGTTTAAAGAGGTTATTTTAACACCTACTCATCTGGCGATTGTAATGGAATATGCCTCTGGAGGCGAGCTCTTTGAGAGAATCTGCAATGCTGGGCGTTTTACTGAGGACGAGGCTCGATTCTTCTTTCAGCAACTCATATCCGGAGTTAGTTATTGCCATGCTATGCAAGTATGTCATCGGGACTTAAAGCTGGAAAACACTTTGCTGGATGGAAGCCCGGCACCTCGTTTGAAGATATGTGATTTTGGGTACTCCAAGTCTTCAGTGCTACATTCACAACCGAAGTCAACTGTGGGAACTCCTGCATATATTGCTCCAGAAGTATTGCTGAAAAAAGAGTATGATGGAAAGCTTGCAGATGTCTGGTCATGTGGAGTGACCCTATATGTGATGCTAGTGGGAGCATATCCTTTTGAAGATCCTAATGAACCAAAGGACTTTCGGAAGACAATTCAGAGAATTCTTAGTGTCCAATATGCCATTCCTGACTGTGTTCAAATATCTCAAGAGTGTCGCCACCTTATTTCAAGGATTTTTGTTTTTGACCCAGCAGAGAGAATCACCATGTCTGAAATCTGGAACCATGAATGGTTTCTGAAGAATCTCCCTGCGGACCTAATGGATGAGAGGATAATGAGTAATCAATTTGAAGAGCCAGACCAACCCATGCAGAGCGTTGATACGATCATGCAGATAATTTCAGAAGCTACGGTACCAGCAGCTGGGACCTATACTTTTGACCAGTTAATGGGGGAGCAAATTTATGACTTAGAATCTGAATCTGATGCTGAATCTGAGCTTGATATAGATAGCAGTGGGGAGATAGTGTATGCCATATAG | 1083 | 0.4469 | MDRAALTVGPGMDMPIMHDSDRYDLVRDIGSGNFGVARLMQDKQTKELVAVKYIERGDKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFTEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKLADVWSCGVTLYVMLVGAYPFEDPNEPKDFRKTIQRILSVQYAIPDCVQISQECRHLISRIFVFDPAERITMSEIWNHEWFLKNLPADLMDERIMSNQFEEPDQPMQSVDTIMQIISEATVPAAGTYTFDQLMGEQIYDLESESDAESELDIDSSGEIVYAI | 360 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun3g03779 | 360 | ProSitePatterns | Protein kinases ATP-binding region signature. | 29 | 52 | IPR017441 | GO:0005524 | |
Viun3g03779 | 360 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 98 | - | - | |
Viun3g03779 | 360 | PANTHER | SERINE/THREONINE KINASE | 22 | 305 | - | - | |
Viun3g03779 | 360 | ProSiteProfiles | Protein kinase domain profile. | 23 | 279 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun3g03779 | 360 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 138 | 150 | IPR008271 | GO:0004672|GO:0006468 | |
Viun3g03779 | 360 | SUPERFAMILY | Protein kinase-like (PK-like) | 16 | 317 | IPR011009 | - | |
Viun3g03779 | 360 | Gene3D | Transferase(Phosphotransferase) domain 1 | 99 | 286 | - | - | |
Viun3g03779 | 360 | FunFam | Serine/threonine-protein kinase SRK2E | 99 | 287 | - | - | |
Viun3g03779 | 360 | Pfam | Protein kinase domain | 23 | 279 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun3g03779 | 360 | CDD | STKc_SnRK2 | 22 | 278 | - | - | |
Viun3g03779 | 360 | FunFam | Serine/threonine-protein kinase SRK2E | 14 | 98 | - | - | |
Viun3g03779 | 360 | SMART | serkin_6 | 23 | 279 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun3g03779 | Viun-Chr3 | 44958526 | 44963777 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun3g03779 | 22 | 289 | CBL-interacting serine-threonine protein kinases | AT4G24400 | 43.321 | 8.25e-67 | 215 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_OST1L | Viun3g03779 | Pkinase | 1.3e-71 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun3g03779 | K14498 | - | gmx:100806949 | 697.582 |