Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03774 ATGGGAGAGACCAATCAACTTGTTATTTTGACAAGATTTCAAGATGCTATCAGAATGGTCATGGACATAGTTGAAAAAGGTAGGAAGAACAAAAGGAGCAAGCGGATACTTAGGTCAACCCTAAAAAATATGACTCTAGTGGTGCAAGAGATAAAGCAATACAATGAACACTTGAATCCACCCAGAGAAGAAATCATCACTCTTGTCAAAGAAAAAGATGCAGGGGAAAAGCTTGTGTGCAATTCATGCTCCCGGAGCTTGTGGTGGACCAAATTTCTATCTTGGTTTTCACTCTACGAGGAGGGTCTTTTGCATCAGAAGAATGATTCGCGTACTGCGGATGACAAGCAAGTTAAGGATATAAAAAATACACTGTACAAGTTGAGAGAGATTATTGAGCTTCTTGATATGGAGAATTTTGAGCAGAAGATTAAAGGAGCTGGAATGACAATTAAGTCTCCTTATGGTGTTCCTGAAAACCCAGAATTTACTGTTGGCTTCGGTCCACTGTTGAGCAAGTTGAAGATGGAGGTTCTCCAGGAGGAAGGTGTGTCCACCCTTTTGTTGTCTGGCCTGGGTGGATCAGGTAAAACAACCTTGGCTACAATGCTCTGCAAGGATAAAGAAGTCAAGGGTAAATTCAAGAACAATATTTTGTTTGTCACCATCTCCCAAACGCCTAAGTTGAAGAATATCGTAGAGAGATTATTTGAACATTGTGGCTACCACGTGCCTGAGTTTGTAAGTGATGAAGATGCAATTAAACGGTTGGAAATTTTGATGAGGAAAATTGAGGGAAGTCCACTGTTGTTGGTCTTGGATGATGTTTGGCCCAGCTCGGAAGCCCTTGTTGAGAAGTTTAAATTCCAGATGTCTGATTATAAAATTTTGGTGATTTCAAGGGTTGCATTTCCTAAATTTGGCACCCAATTCATCTTGAAACCCCTTGCTCACGAAGATGCAATGACTCTTTTCCGTCACCACGCCCTCTTGGATGAAAGAAGTTCAAAATGCAGTTTAAGTATTCCTAACGAAGAAATTGTCCAAAAGGTTGTGAGATATTGCAAGGGTTTACCGCTTGCCATTAAAGTGATTGGTAGATCACTGAGTAATCAGTCTCTTGAGTTGTGGCAAAAGACGCTGGATGAGTTATCACAAGGTCATTCTATACTTGATTCTAGTACTGAATTAATTTCATGCTTCCAAAAGCTCTTGGATGTTTTAGAAGATAATCCCATTACCAAGGAGTGCTTCATGGACCTTGGGTTATTTCCTGAAGATCAAAGAATTCCCCTTCCTGCTCTCATTGACATGTGGGCAGAATTGTACAAATTAGATGATGATGGCATAGAGGCAATGGAAATCATAAAAAAGTTAGACTCCATGAATCTGGCTAATCTTTTAGTAGCAAGGAGAAACACAAGTGACTCAGACAATTACTACTACAATAATCACTTTGTCGTCCTTCATGATCTTCTAAGAGATCTTGCAATTTATCAGAACAACCGGGAACCAATTGATCACAGAAAGAGAATTATTACTGGCATAAATGAAAATCAAAGTCAACGGTGGCTTGGGGAAAAGCAACACGGCATGTTGTCCCGCTTGTTGTCAAAATATCGCGGATGGTGTGTCAAACAGACTATTCAACAGGTCTCAGCCCGCACATTGTCGCTGTCAACTGATGAAACTTGTGCTTCATATTGGTCCGACTTACAACCATCCCAAGCAGAAGTTCTGATTTTAAATCTTCAAACTAAGAAGTACACCTTTCCAGAGTTCATGGAGAAAATGATTAAATTAAAAGTTCTTATCATGACAAATTATGGTTTTCATTATTCTGAAGTGGACAATTTCCAACTACTAGGTTCTGTATCGAACCTGAAAAGAATCAGACTAGAGCGGATTTCTGTTCCTCACTTGGGCGCATTGAAAAATCTTAAAAAGTTATCTCTCTACATGTGTAGTAACATAAGCCAGGCTTTTGAAAATGGCACCATCCTAGCTTCAGATTCATTTCCAAGTTTATTAGATTTGAACATTGACTATTGCAAGGATATGGTCAAATTGCCTAATGGGATCTGTGACATTACCTCTCTAAAGAAGCTCAGCATTACTAATTGCCACAAACTTTGTTCTCTGCCCCAAGAAATTGGACAGTTGTTGAATTTGGAACTCCTGAACCTAAGTACCTGTACTGACTTGGAAGAGATACCAGATTCTATTCAAAACCTCGCTAAGCTAAGACTTCTTAACATCTCAAACTGCATAAGCCTTTCAAATTTACCAGAGGAATTTGGCAATTTATGTAATCTCAGAAATCTCAATATGACAAGCTGTGCAAGATGTGAATTGCCATACTCAATAACCAATCTTGAGAATTTAAAAGTAGTGGTATGCGATGAGGAGACAGCAGCCTCATGGGAAGCATTCGAAGCTATGCTTCCCAACCTGAAGGTGGAGGTTCCTCAAGTTGATGTTAACCTAAACTGGCTTCATTCAATAAGCTCCTAA 2514 0.3946 MGETNQLVILTRFQDAIRMVMDIVEKGRKNKRSKRILRSTLKNMTLVVQEIKQYNEHLNPPREEIITLVKEKDAGEKLVCNSCSRSLWWTKFLSWFSLYEEGLLHQKNDSRTADDKQVKDIKNTLYKLREIIELLDMENFEQKIKGAGMTIKSPYGVPENPEFTVGFGPLLSKLKMEVLQEEGVSTLLLSGLGGSGKTTLATMLCKDKEVKGKFKNNILFVTISQTPKLKNIVERLFEHCGYHVPEFVSDEDAIKRLEILMRKIEGSPLLLVLDDVWPSSEALVEKFKFQMSDYKILVISRVAFPKFGTQFILKPLAHEDAMTLFRHHALLDERSSKCSLSIPNEEIVQKVVRYCKGLPLAIKVIGRSLSNQSLELWQKTLDELSQGHSILDSSTELISCFQKLLDVLEDNPITKECFMDLGLFPEDQRIPLPALIDMWAELYKLDDDGIEAMEIIKKLDSMNLANLLVARRNTSDSDNYYYNNHFVVLHDLLRDLAIYQNNREPIDHRKRIITGINENQSQRWLGEKQHGMLSRLLSKYRGWCVKQTIQQVSARTLSLSTDETCASYWSDLQPSQAEVLILNLQTKKYTFPEFMEKMIKLKVLIMTNYGFHYSEVDNFQLLGSVSNLKRIRLERISVPHLGALKNLKKLSLYMCSNISQAFENGTILASDSFPSLLDLNIDYCKDMVKLPNGICDITSLKKLSITNCHKLCSLPQEIGQLLNLELLNLSTCTDLEEIPDSIQNLAKLRLLNISNCISLSNLPEEFGNLCNLRNLNMTSCARCELPYSITNLENLKVVVCDEETAASWEAFEAMLPNLKVEVPQVDVNLNWLHSISS 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03774 837 Gene3D - 316 397 IPR042197 -
Viun3g03774 837 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 421 IPR027417 -
Viun3g03774 837 SUPERFAMILY RNI-like 586 818 - -
Viun3g03774 837 Gene3D - 144 304 IPR027417 -
Viun3g03774 837 Pfam NB-ARC domain 176 387 IPR002182 GO:0043531
Viun3g03774 837 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 8 832 IPR039203 GO:0050832
Viun3g03774 837 Gene3D Ribonuclease Inhibitor 532 815 IPR032675 -
Viun3g03774 837 PRINTS Disease resistance protein signature 186 201 - -
Viun3g03774 837 PRINTS Disease resistance protein signature 743 759 - -
Viun3g03774 837 PRINTS Disease resistance protein signature 355 369 - -
Viun3g03774 837 PRINTS Disease resistance protein signature 263 277 - -
Viun3g03774 837 Gene3D - 401 501 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03774 Viun-Chr3 44932215 44938742 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03774 624 795 WRKY Transcription Factor Family AT4G12020 27.551 3.56e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03774 - - gmx:100800632 1301.19