Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03771 ATGGACCAGACCACGCAGCGCGTTGTACTTCCAGCACTATTTCAAGAGAGATTGAGAATGGTATCGGAAATAGTGGAAAAAGGTCAAAGTAGTGAAAGCAACAAGCAGATACTGAGGTCAACGCTCAAGGATATGAACCCCGTGGTGCAAGAGATCAAGCACTACAATGAACACTTAAATCCACCCAGAGAAGAAATCAAAACCCTTATTTCAGAAAAGGATGCGAAAGAAGAGCTTGTGTGCAAATGCTTATCCAAAAAAATTTGTTTGGACAAGTGTCTCTCCTGGTTTCTGTGCAGATTTGGACACAAGAGGGATGGTTCATTTGCTGGTGGTGACAAGCAAGCTCTTGTGGCAAAAGATATTGAAGAGAAACTGTACAAAGTTAGGGAAATTCTTGAGCTTCTCAGCAAAGAGAATTTTGAGCCGAAGCTTGGTGGTGTTGGAGGACCTATCAAGCTTCCTTTTGGTGTTCCTGAAAACCCAGATTTCACTGTTGGCTTGGATGTGCCGTTGAGCAAGTTGAAGATGGAGGTTCTCAGAGATGGTATGTCCGTTATTATGGTGACTGGTTTGGGTGGAATGGGGAAAACCACTCTTGCTACAAAGCTCTGTTGGGATGAACAAGTCAAGGGTAAATTTGGCGGAAATATTTTATTTGTCACCGTCTCAAAAACTGCCAACTTGAAGATTATTGTAGAAAGATTATTTCAACACTGTGGATATCAAGTACCCCATTTTCTAAGTGATGAAGATGCAGCTAATCAATTGGGACTTTTGCTTAGGCAAATTGGTAGAAGTTCAATGTTGTTGGTACTGGATGATGTTTGGCCTGGCTCAGAAGCGCTTGTCGAGAAATTTAAAGTCCAGATACCAGATTATAAAATTTTGGTGATTTCTAGGGTTGCATTGCTTAAATCGGACATGCAGATTATCTTAAAACCACTTGGTCATGATGATGCAGAAACTCTTTTCCGACATTATACGCACTTGGAAGAAAGTGGTGCAAGTATTCCTGATGAAGTCATCCAAAAGATTGTGAGAAACTGCAAGGGTTTACCACTTGCCATCAAAGTAATTGGGAGATCACTCTGTAATCAGCGTTCTGAACTGTGGCTAAAGATGATGGAGGAATTGTCCCAAGGTCGTTCTATACTTGATTCTAATGTTGAACTACTTACATGCCTCCAAAAGATATTGGATGTTTTGGAAGATAATATTGTCATCAAAGGGTGCTTCATGGACCTAGGGTTATTTCCTGAAGACCAAAGAATTCCTGTTGCTGCTCTCATTGACATGTGGGCAGAGTCGTATAGACATGATGATGACGGCAAAGAAGCAATGGCCATCATTAACAAATTAGACTCCATGAATCTAGTTAATGTCATGGTAGCAAGGAAAAATGCTACTAACACAGACAATTACCACTACAATAACCACTTCATCGTTCTTCATGACCTTCTGAGAGAGCTTGCAATTTATCAGTGCTCCCAGGAACCAATGGAACAGAGAAAAAGATTGATTATTGAGATAAATCAAAATAAACATGGGGAGAAGACAAAATTTCTTAGCTGGTGTGAACAGAAGCCCCAGCAAGTCACTGCCCACACATTGTCTATATCAACTGATGAAAATTGCCCTTCAGATTGGCCCCAAATGCAACTAGCTCAAGTTGAGGTTCTAATTTTTAATCTTCGAACTAAACAGTATTCCTTCCCAGGTTTCATGAAAGATATGAACAAACTAAAAGTTCTGACAGTCACAAATTACAGTTACTATCCTTCTGAAATCAACAACTTTGAGCTACTTGGCTCTTTATCCAACCTGAGAAGAATCAGATTAGAGCGGATTTCTGTTCCTTCCTTTGTTGCAATGAAGAATCTTACAAAGTTGTCCCTCTACTTCTGTAATATGAAACAGGCATTTGAAAACAATAACCTGCTAATTTCATACGCTTTTCCAAATCTTGAAGATTTGAATATTGACTATTGCAAGGATATGGTGGGATTCCCTAAGGGGCTCTGTGATATCATCTCCCTGAAGAAGCTCAGTATTACTAATTGCCACAAACTCTCTGCACTGCCGCAAGATATTGGAAAGTTGGAGAATTTGGAACTGCTAAGGCTCAGTTCTTGTACCGATTTAGAAGGGATACCTGATTCTATTGGAAGACTTTCAAATCTACGACTTCTTGACATCTCAAATTGCATAATCCTTCCTAATTTACCGGATGACTTTGGTAATCTGTCTAATCTACAAAATCTCTACATGGCAAGTTGTGCAAGGTGTGAATTACCATTCTCAGTCACTAATCTTGGGAATTTAAAGGTGGTGATATGCGATGAAGAGACAGCTGCTTCTTGGGAAAATTTCAAACCTATGCTTCCCAATTTAAGGATAGATGTTCCTCAAGTTGATGTTAACTTGAATTGGCTTCATCCAACTTCCTCCTAG 2454 0.3981 MDQTTQRVVLPALFQERLRMVSEIVEKGQSSESNKQILRSTLKDMNPVVQEIKHYNEHLNPPREEIKTLISEKDAKEELVCKCLSKKICLDKCLSWFLCRFGHKRDGSFAGGDKQALVAKDIEEKLYKVREILELLSKENFEPKLGGVGGPIKLPFGVPENPDFTVGLDVPLSKLKMEVLRDGMSVIMVTGLGGMGKTTLATKLCWDEQVKGKFGGNILFVTVSKTANLKIIVERLFQHCGYQVPHFLSDEDAANQLGLLLRQIGRSSMLLVLDDVWPGSEALVEKFKVQIPDYKILVISRVALLKSDMQIILKPLGHDDAETLFRHYTHLEESGASIPDEVIQKIVRNCKGLPLAIKVIGRSLCNQRSELWLKMMEELSQGRSILDSNVELLTCLQKILDVLEDNIVIKGCFMDLGLFPEDQRIPVAALIDMWAESYRHDDDGKEAMAIINKLDSMNLVNVMVARKNATNTDNYHYNNHFIVLHDLLRELAIYQCSQEPMEQRKRLIIEINQNKHGEKTKFLSWCEQKPQQVTAHTLSISTDENCPSDWPQMQLAQVEVLIFNLRTKQYSFPGFMKDMNKLKVLTVTNYSYYPSEINNFELLGSLSNLRRIRLERISVPSFVAMKNLTKLSLYFCNMKQAFENNNLLISYAFPNLEDLNIDYCKDMVGFPKGLCDIISLKKLSITNCHKLSALPQDIGKLENLELLRLSSCTDLEGIPDSIGRLSNLRLLDISNCIILPNLPDDFGNLSNLQNLYMASCARCELPFSVTNLGNLKVVICDEETAASWENFKPMLPNLRIDVPQVDVNLNWLHPTSS 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03771 817 Pfam NB-ARC domain 181 383 IPR002182 GO:0043531
Viun3g03771 817 SUPERFAMILY RNI-like 570 780 - -
Viun3g03771 817 Coils Coil 119 139 - -
Viun3g03771 817 PRINTS Disease resistance protein signature 186 201 - -
Viun3g03771 817 PRINTS Disease resistance protein signature 350 364 - -
Viun3g03771 817 PRINTS Disease resistance protein signature 723 739 - -
Viun3g03771 817 PRINTS Disease resistance protein signature 263 277 - -
Viun3g03771 817 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 10 85 IPR008808 -
Viun3g03771 817 Gene3D - 152 311 IPR027417 -
Viun3g03771 817 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 6 812 IPR039203 GO:0050832
Viun3g03771 817 Gene3D - 316 392 IPR042197 -
Viun3g03771 817 Gene3D Ribonuclease Inhibitor 494 797 IPR032675 -
Viun3g03771 817 Gene3D - 395 493 IPR036388 -
Viun3g03771 817 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 416 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03771 Viun-Chr3 44885108 44890062 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03771 571 772 WRKY Transcription Factor Family AT4G12020 27.941 6.41e-06 48.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g03771 3 44885108 44890062 Viun3g03771 3 44885108 44890062 ECH