Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03770 ATGGCTATGATTCTGGATGCTGTTCTTGGAAAAGTGCTTGATCAATTGCTGAGCACTGTTGTGGACATGAAAGACAGGGCAGTGAAGTTCAGAGACACCCTGAATAAGTTGCATTCCACCCTCGAAAAAGTAGCACCGATGGCTAGGCAGATAGATGGTCTTAACAAGCGATTGGATAAACCAGCTACAGAAACGCAGAAGCTGATAGATCAGATCAAGCAGGGGAAGGAGCTTGTTATGGAGTGCTCCAAAGTTGATTGGTGGAATTTCTGTTATAAGGCCAATTCCCAACAGAAACTTCAAGACTTAATCGATTCTATTTATGAGTACTTCAAATTGGATATGCAAGGAAATATAAATATCATTGTGTTGGAAAACCAGATCATGCTTTCTGAGATTCACGCGACGCTTATGGAGAATGTTCCGAGAAGGACTGAATTAAAAGGCTTGTGCTCTCCACCTGAACCCCCAGCTTTCACTGTTGGGCTGGATGTTCATCTGAGGGCGTTGAAGTTCAAGTTGCTGAATAATCATCATGTGGGGTCAGTGCTCACAGTAACTGGAACAGGAGGTTCGGGAAAGTCAACGTTGGCCAAGAAGTTTTGTTCTGACAAGGAAGTTAAAGGTAAATTCAAGGACAACATATTCTTCATCTCCTTAGTGGATGTGGAAGCGCCCAAGTTCAGAACCATAGTGGAGAGATTGTTTGAACACAATGGTTGCAAGAAGCCACAGTTTCAAAGTGATGAGGGTGCAGTTTATCGATTGGAAACTTTGCTAAAAGAGATTGGAAAAAACCCCATGTTGTTGGTCCTGGACGGTGTCTTGCCAGAGTCAGCATCTCTAGTAGAGAAATTCGTGTTTCAGATCCCAAACTACAAGATTTTAGTGACATCAAGATTCGCAATTAAAGGATTTGGACAGCCATACGTGTTGAAATCACTGAATGAAGCCGATGCTTTAAACTTATTTCGCCACTCTGCATCCCTGGATCAGACTAGTTCTGAAATTCCCGATAATGTTGTCAAGAAGATAGCAAAAGGGTGCAGTGGTTCTCCCTTGGCTCTTATAGTGACCGGCAAATCTTTAAGTCTTGAAGCACCAGTGGTTTGGCAAAACAGGGCGAAGACATTGTCAAAGGGTCACTCTATTCTTGCCTATAGTTCTAGTAACGATGTTCTTCATACTTGCCTCCAAAATTGCTTTGATGACTTGAATGCTAAGGTTGCTGAGGTGTTTACGGACCTGAGTTTATTTCCTGAAGCACAGAAGATACCCGCTGCAGCTCTTGTTGATATTTGTGCAGAACAGCGTGATGAAGATGATGACATTGCTATGGAGAATATCCTTGAACTCGTCAAAAGGAACGTGGCTGATCTTATTGTCACAAGGATTGGCACAGTTGACTACAACTACCACTATGTTACGCAGCATGGTCTTCTTCGGGACCTAGCCATCCATCAAACAAGAAATTTGCCGACTGAGAAGAAGCATAGACTAATAATTGACCTAAGAGGGAACAATATTCCCAAATGGTGGACTACACAGAATGAGTATCACATTGCAGCCCGCACATTATCCATATCAACTGATGAAGAATTCACTTCAGATTGGTGCAACTTGCAGCCAAATGAGGTTGAGGTTTTAGTGATGAACCTTAGAGAAAAGAAGCGCTCGCTACCACCGTTCATGATGAAGATGAATAAATTAAAAGTCCTGATTATAACGAATTATGACGTCAATCGTGCTGAGTTGGAGAATTTAGAGGTGCTTGATTATCTTACTGATCTCAAACGAATCAGGTTAGAGAAGGTTTCGATTCCTTTCCTGAGCAAGACTGGAGTGGCACTGAAGAATCTGCACAAGTTCTCTTTCTTTATGTGCAATGTGAACGAAGCCTTCAAAAACAGCACCATCAACGTTTCTGATGTGCTGCCAAATCTGAAGGAGATGAACATTGATTACTGTGATGTGGAGGAATTGCCAGCTGGACTCTCTGATATTGTTTCCCTAAAGAAGCTAAGCATCACAAACTGCCATAATCTTTCTAAACTTCCTGAAGGAATTGGAAAGTTGGTGAATTTGGAATCATTGAGGCTTACTTCTTGTACCAAGTTAGAAGAGTTGCCAGACACCATCACAAACCTTCATAAACTGAACTTTCTTGACATTTCTGACTGTGTAAACCTTGGTATGTTACCAGAGAACATAGGGGAGCTTCGTAGTTTAGAAAGGTTCAATTGCAGAGGTTGCACCAGATTGTCTGAATTGCCATACTCAGTCACGGAGCTTGAGAGCTTAAGAGTCGTAGTATGCAATGAAGAGACGGCTGCATTATGGGAACCTATCAAACCCATGTTTAGTGATCTAAAGCTAGAGGTAGTCCTCATTGATTTCAAACTAGAATCTATTTCTTAA 2418 0.4185 MAMILDAVLGKVLDQLLSTVVDMKDRAVKFRDTLNKLHSTLEKVAPMARQIDGLNKRLDKPATETQKLIDQIKQGKELVMECSKVDWWNFCYKANSQQKLQDLIDSIYEYFKLDMQGNINIIVLENQIMLSEIHATLMENVPRRTELKGLCSPPEPPAFTVGLDVHLRALKFKLLNNHHVGSVLTVTGTGGSGKSTLAKKFCSDKEVKGKFKDNIFFISLVDVEAPKFRTIVERLFEHNGCKKPQFQSDEGAVYRLETLLKEIGKNPMLLVLDGVLPESASLVEKFVFQIPNYKILVTSRFAIKGFGQPYVLKSLNEADALNLFRHSASLDQTSSEIPDNVVKKIAKGCSGSPLALIVTGKSLSLEAPVVWQNRAKTLSKGHSILAYSSSNDVLHTCLQNCFDDLNAKVAEVFTDLSLFPEAQKIPAAALVDICAEQRDEDDDIAMENILELVKRNVADLIVTRIGTVDYNYHYVTQHGLLRDLAIHQTRNLPTEKKHRLIIDLRGNNIPKWWTTQNEYHIAARTLSISTDEEFTSDWCNLQPNEVEVLVMNLREKKRSLPPFMMKMNKLKVLIITNYDVNRAELENLEVLDYLTDLKRIRLEKVSIPFLSKTGVALKNLHKFSFFMCNVNEAFKNSTINVSDVLPNLKEMNIDYCDVEELPAGLSDIVSLKKLSITNCHNLSKLPEGIGKLVNLESLRLTSCTKLEELPDTITNLHKLNFLDISDCVNLGMLPENIGELRSLERFNCRGCTRLSELPYSVTELESLRVVVCNEETAALWEPIKPMFSDLKLEVVLIDFKLESIS 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03770 805 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
Viun3g03770 805 Gene3D - 144 304 IPR027417 -
Viun3g03770 805 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 415 IPR027417 -
Viun3g03770 805 Gene3D - 314 401 IPR042197 -
Viun3g03770 805 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 7 131 IPR008808 -
Viun3g03770 805 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 2 795 IPR039203 GO:0050832
Viun3g03770 805 Gene3D - 402 489 IPR036388 -
Viun3g03770 805 Gene3D Ribonuclease Inhibitor 496 786 IPR032675 -
Viun3g03770 805 PRINTS Disease resistance protein signature 349 363 - -
Viun3g03770 805 PRINTS Disease resistance protein signature 183 198 - -
Viun3g03770 805 PRINTS Disease resistance protein signature 714 730 - -
Viun3g03770 805 PRINTS Disease resistance protein signature 262 276 - -
Viun3g03770 805 SUPERFAMILY L domain-like 494 776 - -
Viun3g03770 805 Pfam NB-ARC domain 166 403 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03770 Viun-Chr3 44863093 44867173 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03770 651 770 WRKY Transcription Factor Family AT4G12020 31.405 1.83e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03770 - - vra:106755496 1180.24