Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03748 ATGTTCCACCACAACATAAACTTCGCACTGCTTCTCTCCATCTTCGTTTTCTGTTCAACGATCGCCGCAACTGCCACCAACTGCAGACCCAGTTGCGGACAACATTCCCTGCAATACCCTTTTGGCTTCTGTTCTGACAGCAAAGTCAAACTAAACTGCAGCAACGACGGTACGAAAGTCAAAATCGGCGAGTTCGAGGTTCAGAATATAACCTCTGATGGCATATTCGTGAGTCTTCCGGTGAAGTGCAACCGCAGCATGGGAATCGTAGACCCTCTTTTCGGTGTTAACTTTTCTCCTACGTTCAACAATAGCTTTCTGTTGCAGGGTTGCAAGTCCAAATTCAATAGCTGCGATATTACCCCGTCGAGTTTCGTTGGCGACCACAACCCGGTGGAGGGGTGTGACCGGAAAAACGAAAGTGAAGATTTTATTTGCTTCAAGCAGTTGCCGCGTAATAGTTCGCGGCGTGAAGATGTGCTCCAGCAGAGTGATTTGATGGGAATTGGGTGTAACTTCTTGTTTTCTGCTATTGCTTATGATAAGAGTAAAGGAAAAGAGCTTTTGCTCCAATTACAGATGCTTGAGTTGGGGTGGTGGCTTAAAGGGCCGTGTAACTGCTCCAACAATGCTTCCTGCACGGTGGTCAAGCTTGGCACAAAAGATCAAGGCTACCGGTGCCGGTGCCATGAAGGTTTCGTGGGCGATGGTTTCAAAGACGGCGATGGTTGCAGGAGTACCTTTTCATCAGTTCGTCAATGCAAAGGTTCAACACTATGGCCTGGCGGATGTAGAAAAGCAATCAAAATCGTTGTCCTTGTTGGAGTGGTCATAATTGCGGCTATCCTGGTGGTTGCTCTGTCTCTTCTATGTTACTTTACTAGGCGTCGTTCCTCTTGGCTGAGAAAACAAGTTACAGTAAAGCGCTTATTACGAGAAGCTGCAGGCGACTCTACTGTTCCTCTATATCCCTACAAAGAAATAGAAAGAGCCACAAGTTTTTTCGATGAAAAACATAGGCTGGGAACTGGGGCATTTGGCACAGTTTATGCAGGACACCTTCACAACGATGAGTGCGTTGCTATAAAAAAGATTAAGTATAGAGACACCAATAGTGTTGACCAAGTCATAAACGAGATCAAGCTCCTTTCTTCAGTGAGTCACCCAAACTTAGTGCGCCTCCTAGGTTGTTGCATAGAAGGGGGAGAACAGATACTTGTGTATGAGTATATGCCCAATGGAACACTATCTGAACATTTGCAAAGGGAAAGGGGTGGAATACTTCCATGGACAATAAGACTCACCATTGCTACAGAAACTGCCAATGCCATAGCATATCTACATTCTGCGATTAACCCTCCAATATATCACAGAGACATAAAATCCAGCAACATACTCTTGGACTACAATTTTCAATCAAAAGTGGCAGATTTTGGGCTTTCTAGGCTTGGCATGTCAGAAACATCACATATCTCAACCGCCCCACAAGGGACCCCGGGCTATGTTGATCCCCAATATCACCAGAACTTTCACCTTTCTGATAAAAGTGATGTCTACAGTTTTGGAGTGGTTTTGGTAGAGATAATAAGTGCCATGAAAGTGGTTGATTTTTCGCGACCAAAAAGTGAAACCAATTTGGCTGCACTTGCAGTTGAAAGGATCAGGAGGGGTTGTCTCGATGATATCATTGATCCATTCCTTGAGCCACATAGGGATGCTTGGACACTCTATTCTGTTCACAAGGTGGCTGAGCTTGCATTTAGATGCCTTGCTTTTCATAGTGACATGAGGCCTACAATGATTGAAGTGGCTGAGGAGCTTGAAGTTATCAGACGCAGTGAGTGGGAAACTTTGGAGGAAACCATATGCACAGCTTCATCGGTTGGGTCCGTGTGTTCATCGCCTCGAATAGGAAGAGAGAATTCATTGGTTGGTGCTAGTTTTGAGAGAGTTGGAGGACAAGGGAGTGAGACATTGATTGTTCCACCCAAGACTGAAATGTTTTTGCAATCAATGACGGAAGTGAAGGACAATTCTCCTGTATCTGTGCATGATGCTTGGCTCAGTGGAACTAGCTCACCTTCAACAAATTGCTAG 2097 0.4511 MFHHNINFALLLSIFVFCSTIAATATNCRPSCGQHSLQYPFGFCSDSKVKLNCSNDGTKVKIGEFEVQNITSDGIFVSLPVKCNRSMGIVDPLFGVNFSPTFNNSFLLQGCKSKFNSCDITPSSFVGDHNPVEGCDRKNESEDFICFKQLPRNSSRREDVLQQSDLMGIGCNFLFSAIAYDKSKGKELLLQLQMLELGWWLKGPCNCSNNASCTVVKLGTKDQGYRCRCHEGFVGDGFKDGDGCRSTFSSVRQCKGSTLWPGGCRKAIKIVVLVGVVIIAAILVVALSLLCYFTRRRSSWLRKQVTVKRLLREAAGDSTVPLYPYKEIERATSFFDEKHRLGTGAFGTVYAGHLHNDECVAIKKIKYRDTNSVDQVINEIKLLSSVSHPNLVRLLGCCIEGGEQILVYEYMPNGTLSEHLQRERGGILPWTIRLTIATETANAIAYLHSAINPPIYHRDIKSSNILLDYNFQSKVADFGLSRLGMSETSHISTAPQGTPGYVDPQYHQNFHLSDKSDVYSFGVVLVEIISAMKVVDFSRPKSETNLAALAVERIRRGCLDDIIDPFLEPHRDAWTLYSVHKVAELAFRCLAFHSDMRPTMIEVAEELEVIRRSEWETLEETICTASSVGSVCSSPRIGRENSLVGASFERVGGQGSETLIVPPKTEMFLQSMTEVKDNSPVSVHDAWLSGTSSPSTNC 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03748 698 FunFam Wall-associated receptor kinase-like 14 302 410 - -
Viun3g03748 698 Gene3D Laminin 201 240 - -
Viun3g03748 698 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
Viun3g03748 698 ProSitePatterns Protein kinases ATP-binding region signature. 341 364 IPR017441 GO:0005524
Viun3g03748 698 Gene3D Transferase(Phosphotransferase) domain 1 411 628 - -
Viun3g03748 698 FunFam Wall-associated receptor kinase-like 20 411 620 - -
Viun3g03748 698 SUPERFAMILY Protein kinase-like (PK-like) 318 609 IPR011009 -
Viun3g03748 698 ProSiteProfiles Protein kinase domain profile. 335 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g03748 698 CDD STKc_IRAK 341 608 - -
Viun3g03748 698 SMART serkin_6 335 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g03748 698 Pfam Protein kinase domain 336 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g03748 698 Gene3D Phosphorylase Kinase; domain 1 296 410 - -
Viun3g03748 698 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 10 688 IPR044652 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03748 Viun-Chr3 44506618 44510871 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03748 1 697 Receptor kinase-like Gene Family AT2G23450 52.266 0.0 681
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Viun3g03748 Pkinase 3.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03748 - - gmx:100810861 1085.09