Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03732 ATGGGAATAGCAACACCCTCTTCTTCCCTTCCTTCTATTATTTCTCACCCCAAGACACACCAGCAACACCATTCCAATTCTATGTCCCAAGACTACGGCCATCACCAAGGAATCTTCAGCTTCCCGAATGGGTTCCAGAGATCGGCTACAACCATGAGTCACCAAGACCCTCACCAACAACAACAGCAGCACCAGCAGATTCGTAGGGACAAAGTGAGGGTGCAAGGCTTCGAGCCACAACAAACTTTGGTCCCCATAGAGGAAGACGAACCGGGAAGCCTCCCTGTGTACGAAACCGCGGGTATGTTATCGGAGATGTTCACTTTCCCTCCCGGCGCCGCCACGGAATTATTGGAGCAACAGCAACAACAGGCACAGCAGCAACAATCAATGACGACGACGTTTCGATCGTCGGCAAGAGCAGTGGGCAGTGGTGGCAGCGAGTGGTACGGAAACAGACAAGGGATGCTAACCGGGTTGGGACCGTTGGGAGATTCCAAGAATCATCATCATCATGGCAGTGTGAATAGCCGTGACAGTAGCAGCAGCAGCATAGTTCAGCATCAACATCATCATCATCACCACAACCACCATCATCAGCATCAGATGTCAAGCATTAATGCAGACTCAGCAGCTGCCATGCAGCTTTTTCTCATGAACCCGCAAAGCACCAGATCCCCTTCTCCCCCTCCGCCTCCTTCTTCCACTCTCCACATGTTACTTCCCACGTTTCCTCCGGGCTCAGGAGGGTCTTTTGGTCAATTCACGTGGCTCCCTGACACTGCTCAAGATGGAGGAGGACCCAGTACGGTTGTGGAAGGCCCCGGTCACGGCCAAGGTCTTTCCTTATCCTTGTCCTCCTCCTTAGAAGCTGCGAAAGCGGAGGAACTTAGGATGGGGGATAGTGGGTTTTTGTATTACAATCAAGCTAGTGGAGGACCCTCTTCCTATAAGAGTGCTCTTGGGGGTCATCACCACCAAGCATTGTTGGGACAGACCCACCAGGGGCATGTTGGCTTTGCGCCATCATCCTCCACATCATCCTTAGGTGTTGTCAACGCCTTGAGGAATTCCAAGTATATTAAGGCTGCTCAGGAATTGCTTGAAGAGTTTTGCAGTGTTGGGAGGGGCCAGTTCAAGAAGAACAAGTTCAATAGGCAACTCTCAAACCCTAGCTCCAATCTTGGAGCTAGTGGCGGCGGTGGCGGCGGTGCTTCCTCGTCTTTATCAAAGGATGTTCCTCCTTTGTCAGCAGCTGATAGGATTGAGCATCAAAGGAGGAAGGTCAAACTTCTAACAATGCTTGACGAGGTAGATCGGAGATACAGCCACTACTGCGAGCAAATGCACATGGTGGTGAACTCGTTTGACATGGTGATGGGTTTTGGTGCTGCTGTGCCATACACAGCACTTGCGCAGAAAGCAATGTCTCGTCACTTTAGGTGTCTAAAGGATGCCATAACAGCGCAACTGAAGCATAGTTGTGAGCTGTTGGGAGAGAAAGATGGGGCAGGGAACTCAGGGTTGACCAAAGGAGAGACCCCAAGGCTGAAGATGCTTGAACAAAGTCTGAGACAGCAAAGAGCGTTTCACCAAATGGGGATGATGGAACAGGAAGCTTGGAGACCCCAGAGAGGGTTGCCAGAACGATCTGTCAACATTTTGAGAGCCTGGCTTTTCGAGCATTTCCTTCATCCGTACCCAAGCGATGCAGATAAGCATCTGTTGGCACGACAGACTGGGCTATCGAGAAATCAGGTATCAAACTGGTTCATTAATGCAAGGGTTCGATTGTGGAAACCCATGGTAGAAGACATGTACCAACAAGAACTCAAGGAAGCTGAAGGGGCAGAAGAGGAAAGAGAGAGGAACCAAAGCAGCAGCAATAACAGTGGCCACCAACTGGCACAAACCCCAACGCCCTCCACCACGGCATCGACAGCAACAGCGCCACCACCGCCTCCAACAACATCGACAGCGACGACACCACCAACAGCCAAAAGATCCGACACCGAAAGCGACCCTTCACTCGCCCCAATAAATAACAACAGGCCACAGGGAGCCTTCTCGGAAACACAACCCAACTCCTCCACCACCGCCACCGCATCTGAGGTGGCGCCGCCCTCGGAGCTTCCCCGGTCGATGGGGGCTGATGACTCCTGCCGACACGGTAGCCTCGTTGCGACGGAGTTTGGGACTGGTCCCGGCGCTTCTGACATTGGTTCGACACTGATTAGGTTTGGGACCACCGCAGGTGACGTGTCACTGACACTAGGGCTACGCCACGCCGGGAACATGCCGGAGAAAACTCCGTTCTCCGTTAGGGACTTTGGAGGCATTTAA 2343 0.5241 MGIATPSSSLPSIISHPKTHQQHHSNSMSQDYGHHQGIFSFPNGFQRSATTMSHQDPHQQQQQHQQIRRDKVRVQGFEPQQTLVPIEEDEPGSLPVYETAGMLSEMFTFPPGAATELLEQQQQQAQQQQSMTTTFRSSARAVGSGGSEWYGNRQGMLTGLGPLGDSKNHHHHGSVNSRDSSSSSIVQHQHHHHHHNHHHQHQMSSINADSAAAMQLFLMNPQSTRSPSPPPPPSSTLHMLLPTFPPGSGGSFGQFTWLPDTAQDGGGPSTVVEGPGHGQGLSLSLSSSLEAAKAEELRMGDSGFLYYNQASGGPSSYKSALGGHHHQALLGQTHQGHVGFAPSSSTSSLGVVNALRNSKYIKAAQELLEEFCSVGRGQFKKNKFNRQLSNPSSNLGASGGGGGGASSSLSKDVPPLSAADRIEHQRRKVKLLTMLDEVDRRYSHYCEQMHMVVNSFDMVMGFGAAVPYTALAQKAMSRHFRCLKDAITAQLKHSCELLGEKDGAGNSGLTKGETPRLKMLEQSLRQQRAFHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEDMYQQELKEAEGAEEERERNQSSSNNSGHQLAQTPTPSTTASTATAPPPPPTTSTATTPPTAKRSDTESDPSLAPINNNRPQGAFSETQPNSSTTATASEVAPPSELPRSMGADDSCRHGSLVATEFGTGPGASDIGSTLIRFGTTAGDVSLTLGLRHAGNMPEKTPFSVRDFGGI 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03732 780 Pfam Homeobox KN domain 558 597 IPR008422 GO:0003677|GO:0006355
Viun3g03732 780 MobiDBLite consensus disorder prediction 627 645 - -
Viun3g03732 780 ProSiteProfiles 'Homeobox' domain profile. 538 601 IPR001356 GO:0003677
Viun3g03732 780 MobiDBLite consensus disorder prediction 661 705 - -
Viun3g03732 780 MobiDBLite consensus disorder prediction 612 626 - -
Viun3g03732 780 MobiDBLite consensus disorder prediction 384 413 - -
Viun3g03732 780 SUPERFAMILY Homeodomain-like 543 608 IPR009057 -
Viun3g03732 780 MobiDBLite consensus disorder prediction 384 420 - -
Viun3g03732 780 Pfam Associated with HOX 355 488 IPR006563 -
Viun3g03732 780 CDD homeodomain 541 602 IPR001356 GO:0003677
Viun3g03732 780 Gene3D - 544 606 - -
Viun3g03732 780 SMART HOX_1 541 605 IPR001356 GO:0003677
Viun3g03732 780 FunFam BEL1-like homeodomain protein 4 544 606 - -
Viun3g03732 780 MobiDBLite consensus disorder prediction 646 660 - -
Viun3g03732 780 MobiDBLite consensus disorder prediction 187 201 - -
Viun3g03732 780 MobiDBLite consensus disorder prediction 612 721 - -
Viun3g03732 780 MobiDBLite consensus disorder prediction 118 141 - -
Viun3g03732 780 MobiDBLite consensus disorder prediction 118 205 - -
Viun3g03732 780 MobiDBLite consensus disorder prediction 1 62 - -
Viun3g03732 780 Coils Coil 604 627 - -
Viun3g03732 780 MobiDBLite consensus disorder prediction 1 67 - -
Viun3g03732 780 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 192 628 - -
Viun3g03732 780 SMART prehox3 349 489 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03732 Viun-Chr3 44310026 44317453 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03732 349 780 Homeobox Transcription Factor Family AT2G23760 54.713 2.50e-146 443
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Viun3g03732 POX 2.5e-51 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03732 - - gmx:100814959 1127.46