Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03708 ATGGGGGCTGGGGAAGAGAGCACAACTAAACCTTCAAAGTCATCTTCATCAGTTCAGGAGACACCAACAGTGCCTGCATATCCTGATTGGTCAAGCTCCATGCAGGCCTATTATTCTACTGGAGCTACTCCACCCCCCTTTTTTGCCTCAACTGTTGCTTCCCCAACTCCCCATCCCTTTTTATGGGGAAGCCAGCATCCCTTGATGCCGCCATACGGGACTCCAGTCCCATACCCAGCTTTATATCCTCCTGGGAGTATCTATGCTCATCCAAGCATGGCAGTGACTCCGAGTGCTATCCAGCAAAGTACGGAGATTGAAGCGAAGGGAGCTGATGGAAAGGATCGAGACTCGTCCAAAAAATTGAAAGGAACTTCTGCAAATACAGGTTCCAAAGCAGGAGAGAGTGGAAAGGCAGGCTCAGGTTCAGGCAATGATGGCATGTCTCAAAGTGGTGAAAGTGGTTCGGAGGGTTCATCAAATGCCAGTGACGAGAATACTAACCAGCAGGAATCAGCTACAAACAAGAAGGGAAGCTTTGACCTGATGCTTGTGGATGGAGCCAATGCCCAGAACAATTCTGGGGGTGCCATTTCTCAATCTTCTGTGCCTGGAAAGCCTGTTGTCTCAATGCCAGCCACTAATCTTAATATTGGAATGGACTTATGGAACCCCTCATCTGGTGGTGCCGAAGCTGCAAAAATGAGACATAATCAATCTGGTGCCCCAGGAGTTGTTGCCCTTGGTGAACAATGGATACAAGATGAACGTGAGCTGAAAAGACAGAAGAGGAAACAGTCGAACAGAGAGTCAGCTAGGAGGTCAAGGTTACGCAAGCAGGCTGAATGCGAAGACTTACAAAAGAGGGTGGAGACACTGGGAAGTGAGAATCGAAAACTCAGAGAAGAGCTTCAGAGACTTTCTGAAGAATGCGAGAAGCTTACATCTGAAAATAATTCAATCAAGGAAGAGTTGGAACGGATGTGTGGGCCAGAAGCAGTTGCTGACCTTGGATGA 1017 0.4808 MGAGEESTTKPSKSSSSVQETPTVPAYPDWSSSMQAYYSTGATPPPFFASTVASPTPHPFLWGSQHPLMPPYGTPVPYPALYPPGSIYAHPSMAVTPSAIQQSTEIEAKGADGKDRDSSKKLKGTSANTGSKAGESGKAGSGSGNDGMSQSGESGSEGSSNASDENTNQQESATNKKGSFDLMLVDGANAQNNSGGAISQSSVPGKPVVSMPATNLNIGMDLWNPSSGGAEAAKMRHNQSGAPGVVALGEQWIQDERELKRQKRKQSNRESARRSRLRKQAECEDLQKRVETLGSENRKLREELQRLSEECEKLTSENNSIKEELERMCGPEAVADLG 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03708 338 MobiDBLite consensus disorder prediction 123 177 - -
Viun3g03708 338 CDD bZIP_plant_GBF1 261 311 IPR045314 GO:0003700|GO:0006355
Viun3g03708 338 SUPERFAMILY Leucine zipper domain 259 315 IPR046347 GO:0003700|GO:0006355
Viun3g03708 338 MobiDBLite consensus disorder prediction 1 29 - -
Viun3g03708 338 MobiDBLite consensus disorder prediction 258 282 - -
Viun3g03708 338 MobiDBLite consensus disorder prediction 7 29 - -
Viun3g03708 338 MobiDBLite consensus disorder prediction 186 208 - -
Viun3g03708 338 Pfam bZIP transcription factor 256 318 IPR004827 GO:0003700|GO:0006355
Viun3g03708 338 MobiDBLite consensus disorder prediction 107 210 - -
Viun3g03708 338 SMART brlzneu 256 320 IPR004827 GO:0003700|GO:0006355
Viun3g03708 338 MobiDBLite consensus disorder prediction 225 244 - -
Viun3g03708 338 MobiDBLite consensus disorder prediction 309 338 - -
Viun3g03708 338 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 258 321 IPR004827 GO:0003700|GO:0006355
Viun3g03708 338 Coils Coil 269 324 - -
Viun3g03708 338 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 333 IPR044827 GO:0003700|GO:0006355|GO:0043565
Viun3g03708 338 MobiDBLite consensus disorder prediction 309 330 - -
Viun3g03708 338 Gene3D - 259 313 - -
Viun3g03708 338 FunFam BZIP transcription factor 258 309 - -
Viun3g03708 338 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 263 278 IPR004827 GO:0003700|GO:0006355
Viun3g03708 338 MobiDBLite consensus disorder prediction 108 122 - -
Viun3g03708 338 Pfam G-box binding protein MFMR 1 93 IPR012900 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03708 Viun-Chr3 43991574 43996722 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03708 1 337 bZIP Transcription Factor Family AT4G36730 54.572 5.89e-110 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun3g03708 MFMR 2.8e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03708 K09060 - gmx:778124 575.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g03708 3 43991574 43996722 Viun3g03708 3 43991574 43996722 ECH