Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03707 ATGGGGGCTGGGGAAGAGAGCACAACTAAACCTTCAAAGTCATCTTCATCAGTTCAGCAGGAGACACCAACAGTGCCTGCATATCCTGATTGGTCAAGCTCCATGCAGGCCTATTATTCTACTGGAGCTACTCCACCCCCCTTTTTTGCCTCAACTGTTGCTTCCCCAACTCCCCATCCCTTTTTATGGGGAAGCCAGCATCCCTTGATGCCGCCATACGGGACTCCAGTCCCATACCCAGCTTTATATCCTCCTGGGAGTATCTATGCTCATCCAAGCATGGCAGTGACTCCGAGTGCTATCCAGCAAAGTACGGAGATTGAAGCGAAGGGAGCTGATGGAAAGGATCGAGACTCGTCCAAAAAATTGAAAGGAACTTCTGCAAATACAGGTTCCAAAGCAGGAGAGAGTGGAAAGGCAGGCTCAGGTTCAGGCAATGATGGCATGTCTCAAAGTGGTGAAAGTGGTTCGGAGGGTTCATCAAATGCCAGTGACGAGAATACTAACCAGCAGGAATCAGCTACAAACAAGAAGGGAAGCTTTGACCTGATGCTTGTGGATGGAGCCAATGCCCAGAACAATTCTGGGGGTGCCATTTCTCAATCTTCTGTGCCTGGAAAGCCTGTTGTCTCAATGCCAGCCACTAATCTTAATATTGGAATGGACTTATGGAACCCCTCATCTGGTGGTGCCGAAGCTGCAAAAATGAGACATAATCAATCTGGTGCCCCAGGAGTTGTTGCCCTTGGTGAACAATGGATACAAGATGAACGTGAGCTGAAAAGACAGAAGAGGAAACAGTCGAACAGAGAGTCAGCTAGGAGGTCAAGGTTACGCAAGCAGGCTGAATGCGAAGACTTACAAAAGAGGGTGGAGACACTGGGAAGTGAGAATCGAAAACTCAGAGAAGAGCTTCAGAGACTTTCTGAAGAATGCGAGAAGCTTACATCTGAAAATAATTCAATCAAGGAAGAGTTGGAACGGATGTGTGGGCCAGAAGCAGTTGCTGACCTTGGATGA 1020 0.4814 MGAGEESTTKPSKSSSSVQQETPTVPAYPDWSSSMQAYYSTGATPPPFFASTVASPTPHPFLWGSQHPLMPPYGTPVPYPALYPPGSIYAHPSMAVTPSAIQQSTEIEAKGADGKDRDSSKKLKGTSANTGSKAGESGKAGSGSGNDGMSQSGESGSEGSSNASDENTNQQESATNKKGSFDLMLVDGANAQNNSGGAISQSSVPGKPVVSMPATNLNIGMDLWNPSSGGAEAAKMRHNQSGAPGVVALGEQWIQDERELKRQKRKQSNRESARRSRLRKQAECEDLQKRVETLGSENRKLREELQRLSEECEKLTSENNSIKEELERMCGPEAVADLG 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03707 339 MobiDBLite consensus disorder prediction 108 212 - -
Viun3g03707 339 MobiDBLite consensus disorder prediction 259 283 - -
Viun3g03707 339 MobiDBLite consensus disorder prediction 187 209 - -
Viun3g03707 339 SMART brlzneu 257 321 IPR004827 GO:0003700|GO:0006355
Viun3g03707 339 Pfam bZIP transcription factor 257 319 IPR004827 GO:0003700|GO:0006355
Viun3g03707 339 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 259 322 IPR004827 GO:0003700|GO:0006355
Viun3g03707 339 MobiDBLite consensus disorder prediction 109 123 - -
Viun3g03707 339 Gene3D - 260 314 - -
Viun3g03707 339 MobiDBLite consensus disorder prediction 7 31 - -
Viun3g03707 339 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 334 IPR044827 GO:0003700|GO:0006355|GO:0043565
Viun3g03707 339 MobiDBLite consensus disorder prediction 1 31 - -
Viun3g03707 339 FunFam BZIP transcription factor 259 310 - -
Viun3g03707 339 Coils Coil 270 325 - -
Viun3g03707 339 MobiDBLite consensus disorder prediction 124 178 - -
Viun3g03707 339 CDD bZIP_plant_GBF1 262 312 IPR045314 GO:0003700|GO:0006355
Viun3g03707 339 Pfam G-box binding protein MFMR 1 94 IPR012900 -
Viun3g03707 339 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 264 279 IPR004827 GO:0003700|GO:0006355
Viun3g03707 339 SUPERFAMILY Leucine zipper domain 260 316 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03707 Viun-Chr3 43991574 43996724 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03707 1 338 bZIP Transcription Factor Family AT4G36730 54.227 4.63e-109 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun3g03707 MFMR 9.1e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03707 K09060 - gmx:778191 581.637