Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03691 ATGTCAGACTCACACCTGACTTTTTGTTTTCTTTCTTCCATCCTTGCTCTTATAGTCATCACCTTCATTTTCACCAAAAGAAAGAAACCAACCCTTAATCTTCCCCCTGGCCAAACGGGGTGGCCCCTCCTTGGGGAAACCATAGGGTATTTGAGGATTTACAAAGCTCTTACACTAGGAGAGTTTATGCTGAACCACATAGCAAGGTATGGAACCATTTACAGGTCAAACTTGTTTGGGGAGCCAGCCATAGTGTCAGCAGATGCAGGGTTGAACAAGTTCATAATGCAGAACGAAGGGAAGTTGTTCGAGGCTAGTTATCCTAAGAGCATCGGTGGAGTACTTGGAAAATGGTCTATGTTGGTCATAGTAGGAGACATGCACAAACACATGAGGAACATATCACTCAACTTTCTCAGCTATTCCAGGGTCCGAACTCTACTAGTTAAAGACATCGATTACCATGCCCGTCATGTTATTTCTTCGTGGAAACATAATTCTATAGTATCAGCTCAAAACGAAGCAAGAAGGTTCACCTTCAATTTAGTGGCGAAACAAATCATGAGTTTGGATCCTGGTCAACCGGAGACAGAAAAATTGAAGATAGAATACGTCTCTTTCATGAAGGGTGTTGTATCTCTTTTTCCTTTGGATTTGCCCGGAACAGCATACAGGAAGGCATTAAAGGCTAGGTCCACCATTCTGAAGTTCATAGAGGCGAAAATGGAAGAGAGGGCGAAGAGGATCGAAAAGGGTGAGGCAGTGGAGGAAGATAATGATCTTCTAAACTGGGTTTTGACTCATACAAATCTTTCAAATGAGCAAATACTTGACTTGATATTGAGCATGCTCTTTGGTGGTCATGAAACCTCGTCGGTAGCTATATCTCTAGCTATTCACTTCTTGCCCGGTTGTCCTCGAGCTATGCAACAACTCAGGGAGGAACACGTGGAAATAGTCGCTTCCAAGAAGAAGACAGGAGGGGAGGTTGAATTGACTTGGGATGATTACAAAAAAATGGAGTTTACTCACTGTGTTTTGAACGAAACACTTCGACTAGGGAATGTTGTGAGGTATCTTCACAGGAAGGCTATTAAGGATGTTCAGTACAAAGGTTATGACATTCCACGTGGGTGGAAAGTTCTTCCGGTGATTTCAGCTGCACATTTCGATCCTCAACACTATGACCAACCTCACCAATTCAATCCATGGAGATGGCAGGGAAGTAATAGTAAAACTGATAATAACCATTTCATGCCATTTGGAGGAGGATCAAGGTTGTGTCCAGGGTCAGAGTTAGCGAAGGTGGAAATGGCTGTGTTCATCCACCATCTCATCCTGAACTACAACTGGGAACTTCTTGAAGGTGACGAACCTTTTGTATACCCTTATGTGGATTTCCCCAAAGGTCTACCCATCAAAATCCAAGCTACATCATCCATCTAA 1446 0.4308 MSDSHLTFCFLSSILALIVITFIFTKRKKPTLNLPPGQTGWPLLGETIGYLRIYKALTLGEFMLNHIARYGTIYRSNLFGEPAIVSADAGLNKFIMQNEGKLFEASYPKSIGGVLGKWSMLVIVGDMHKHMRNISLNFLSYSRVRTLLVKDIDYHARHVISSWKHNSIVSAQNEARRFTFNLVAKQIMSLDPGQPETEKLKIEYVSFMKGVVSLFPLDLPGTAYRKALKARSTILKFIEAKMEERAKRIEKGEAVEEDNDLLNWVLTHTNLSNEQILDLILSMLFGGHETSSVAISLAIHFLPGCPRAMQQLREEHVEIVASKKKTGGEVELTWDDYKKMEFTHCVLNETLRLGNVVRYLHRKAIKDVQYKGYDIPRGWKVLPVISAAHFDPQHYDQPHQFNPWRWQGSNSKTDNNHFMPFGGGSRLCPGSELAKVEMAVFIHHLILNYNWELLEGDEPFVYPYVDFPKGLPIKIQATSSI 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03691 481 SUPERFAMILY Cytochrome P450 32 464 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g03691 481 Pfam Cytochrome P450 35 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g03691 481 PANTHER CYTOCHROME P450 26 30 459 - -
Viun3g03691 481 Gene3D Cytochrome P450 23 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g03691 481 CDD CYP90-like 66 475 - -
Viun3g03691 481 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 421 430 IPR017972 GO:0005506|GO:0016705
Viun3g03691 481 PRINTS E-class P450 group I signature 295 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g03691 481 PRINTS E-class P450 group I signature 418 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g03691 481 PRINTS E-class P450 group I signature 428 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g03691 481 PRINTS E-class P450 group I signature 384 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g03691 481 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g03691 481 PRINTS E-class P450 group I signature 275 292 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g03691 481 PRINTS P450 superfamily signature 345 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g03691 481 PRINTS P450 superfamily signature 428 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g03691 481 PRINTS P450 superfamily signature 286 303 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g03691 481 PRINTS P450 superfamily signature 419 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g03691 481 FunFam Cytochrome P450 90B1 24 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03691 Viun-Chr3 43801404 43805386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03691 26 412 Cytochrome P450 AT3G50660 66.422 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03691 K09587 - gmx:100800210 739.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g03691 3 43801404 43805386 Viun3g03691 3 43801404 43805386 ECH
Viun2g01974 2 28285252 28289376 Viun3g03691 3 43801404 43805386 PCT