Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03647 ATGTTTCCTTCCAGAGACATGGCCATGGCTTCACCCTCTTCAATCTTCTCTGCTTACGCTTCCATGACAGCTTCCATCATGCTTCTGCGTTCAATAACCAACGACCTCATTCCTCAACCAATTCGTGGATACCTTATCAACACCTTCCGCTACTTCTTCAAGCCTCGCTCCAACACTCTCACTCTCATCATCCAAGAGTACTCCAGCGGCATAGCTCGCAACCATCTCTACGATGCTGCAGAGGTTTACCTGTCCACAAAAATCACCCCCCAGAACGAGAGACTAAGCGTCAGCAAGACTCCAAAGGAGAAAAAGCTCTCCTTAAGACTTGAAAAGGGTGAAGAGCTGGTTGATTGGTTTGATGGGGTTAAACTCAACTGGAATCTCATCTGCTCAGAGTTCGAAAAGGGCAATGGTTCCTATGATCACTCCAGAAACAGCTCCACCAGAACAGAAAAGAAGTACTTTGAGCTAAGCTTTGAGAAGAAGCACAAGGAGATGGTGGTGGAAACTTACTTGCCTTTCGTTATTGACAAAGAGAAGGAGATGAAGGACGAGGAGAGGGTGTTGAAGATGCACACTCTCAACACTTTCTATGGCCACGGAGGGTTCATGTGGGATTCCATTAACTTGGACCACCCTTCAACGTTTGAGACCGTGGCGATGGAGGCAGAGATGAAGAACCACATAATGGAGGATTTGAACAGGTTTTTGAGGAGGAGGGAGTTTTACAGGAAAGCTGGGAGGGCGTGGAAACGAGGGTACCTGTTGTATGGCCCTCCTGGAACCGGCAAATCGAGCTTGATCGCAGCCATGGCGAATTACTTGAAGTTCGATATCTATGATCTCCAACTTGACAACCTAGTCACCGATTCAGACCTCAGAAAGTTGTTGCTGGCAACTGCAAATAGGTCTATTCTTGTGATTGAAGACATTGATTGTAGTGTTGATCTGCCAGGGCGCAGACATGGAGATGGACGCAAGCAACCTAATGTGCAGTTGAGTTTGTGCGGGTTACTGAACTTCATAGATGGGTTATGGTCGAGTTGTGGTGACGAGAGGATCATCATACTCACCACCAACCACAAGGAGAGGCTTGACCCGGCACTGTTGAGGCCTGGAAGAATGGACATGCACATTAACATGTCTTATTGCTCCTACCACGGGTTCAAGGTTTTGGCCTCAAACTACTTGGGCATTTCTTGGGATCATCACCTGTTTGGGGAGATTGAAGGCCTGATAGAGGGCACGCACATAACCCCGGCACAAGTGGCAGAGGAATTGATGAAGAGCGAAGATGCTGAGGTTGCACTACAAGGATTCCTGAAGGTGCTTAAGCGAAAGAAGATGGAAGGTGATGTGTCTGAGAATGATGGTTCTGATAAAACAGAACTTAACCAATCCAAAAGCTCCAAAGTTGGTTGCAAGCAGAAAAGACCAGTTTGTATCAGCAAGAGAAAAAATAGTACGGGTACTCAGAGAAGAACAAGAGCACGTACTTTGCAATAA 1509 0.4685 MFPSRDMAMASPSSIFSAYASMTASIMLLRSITNDLIPQPIRGYLINTFRYFFKPRSNTLTLIIQEYSSGIARNHLYDAAEVYLSTKITPQNERLSVSKTPKEKKLSLRLEKGEELVDWFDGVKLNWNLICSEFEKGNGSYDHSRNSSTRTEKKYFELSFEKKHKEMVVETYLPFVIDKEKEMKDEERVLKMHTLNTFYGHGGFMWDSINLDHPSTFETVAMEAEMKNHIMEDLNRFLRRREFYRKAGRAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDLQLDNLVTDSDLRKLLLATANRSILVIEDIDCSVDLPGRRHGDGRKQPNVQLSLCGLLNFIDGLWSSCGDERIIILTTNHKERLDPALLRPGRMDMHINMSYCSYHGFKVLASNYLGISWDHHLFGEIEGLIEGTHITPAQVAEELMKSEDAEVALQGFLKVLKRKKMEGDVSENDGSDKTELNQSKSSKVGCKQKRPVCISKRKNSTGTQRRTRARTLQ 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03647 502 Pfam Domain associated at C-terminal with AAA 37 130 IPR025753 -
Viun3g03647 502 Gene3D - 207 380 IPR027417 -
Viun3g03647 502 PANTHER BCS1 AAA-TYPE ATPASE 17 450 - -
Viun3g03647 502 MobiDBLite consensus disorder prediction 452 502 - -
Viun3g03647 502 Pfam ATPase family associated with various cellular activities (AAA) 256 383 IPR003959 GO:0005524|GO:0016887
Viun3g03647 502 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 113 434 IPR027417 -
Viun3g03647 502 CDD RecA-like_BCS1 230 382 - -
Viun3g03647 502 ProSitePatterns AAA-protein family signature. 354 372 IPR003960 GO:0005524|GO:0016887
Viun3g03647 502 Gene3D - 381 452 - -
Viun3g03647 502 SMART AAA_5 251 386 IPR003593 GO:0016887
Viun3g03647 502 MobiDBLite consensus disorder prediction 484 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03647 Viun-Chr3 43312489 43314615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03647 253 386 Calmodulin-binding Proteins AT3G56690 28.873 2.59e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03647 - - gmx:100812263 878.241