Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03641 ATGGAGTTTGCTAGTTTCCATCTTCAGCATCAGCTTCAAGAAGAATCTGTTCAGTCTATAACTTCTCCAACCCCACCACCTCACTCTAAACCTTCCATCACCACCACTCATCAATCATGGATCCCAAGCAACATATACAATGGTTGTAATAACAGTGGCTTTCTAACCGAGAGCTTTACAAATTCAAGAGAAGTACAGCACAAGCACGCCATGACTGATTCACTTAGAATCTCAACAAGGCAAGCTTTGGGTTTCCACAATGGAAAAAGCCTTGCTCAACAGCCAGTTAGTGATCTCTTTGCAGCAAGAATCAAAGGTGAAATGATGAACACCTCCATGAAGGCTATGGAGGAATCATGTTCACTAATCCCAATTCATGAACAAAAATACCCTCCTAGTTTCTTATCTAGTCTTGGTGTAACTGGTCTAGAGTTTTTTCCTTCGGAGAATGTCTTTCATAATGACAAGACCCTAAGCAAGAGATATAACAACTTTGATGATGCTTGCTTGATTTCGAACTTACCAACCCTAGATATGACCTCATCTTTGGTTTCATGTTCTTTGGGTTTAAATCCTAAAATGTTTGATCTGCATACAAGTTACAGTGAGGGTTGTGAAATCCAACCTTGCTATGATACTTTTGGTCTAAACGAGAGCATAGCTTTGTGCCACAGCGACATGCATGGCCGCGAAAGTAGTCCATCAAATAGCTCAAAAATTTCATCATTTATAAGTGAAGTTGCAACGACGAAAAGGCCTAGCAGTTTTTCTCTACCAAAAGAATCAGAGGCCAAAGCTAAGAGGTCAAGGACATCATCATGTCCTCCCCTGAAGATAAGAAAGGAAAAATTGGGGGATAGGATTCAAACTCTTCAAAGATTAGTAGCACCTTTTGGGAAGACCAGTACAGCCTCTGTCTTAAGTGAAGCCATTGGCTACATCCATTTCCTTCACCAACAAATCCAGACTTTGAGCATTCCTTACATGAAATCCACGCAAAGCAATAGAATGGTGCAGCTGAATACAAATAAAGTGGATAAAGAAGTGAAGCCAAACCTAAGAAGCAGAGGCTTGTGTCTTGTGCCCCTTTCTTACGCATCATTTATTCATCGTTGCGTTTAA 1122 0.4064 MEFASFHLQHQLQEESVQSITSPTPPPHSKPSITTTHQSWIPSNIYNGCNNSGFLTESFTNSREVQHKHAMTDSLRISTRQALGFHNGKSLAQQPVSDLFAARIKGEMMNTSMKAMEESCSLIPIHEQKYPPSFLSSLGVTGLEFFPSENVFHNDKTLSKRYNNFDDACLISNLPTLDMTSSLVSCSLGLNPKMFDLHTSYSEGCEIQPCYDTFGLNESIALCHSDMHGRESSPSNSSKISSFISEVATTKRPSSFSLPKESEAKAKRSRTSSCPPLKIRKEKLGDRIQTLQRLVAPFGKTSTASVLSEAIGYIHFLHQQIQTLSIPYMKSTQSNRMVQLNTNKVDKEVKPNLRSRGLCLVPLSYASFIHRCV 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03641 373 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 117 367 - -
Viun3g03641 373 MobiDBLite consensus disorder prediction 14 36 - -
Viun3g03641 373 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 268 317 IPR011598 GO:0046983
Viun3g03641 373 CDD bHLH_AtbHLH_like 280 325 IPR045239 -
Viun3g03641 373 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 278 331 IPR036638 GO:0046983
Viun3g03641 373 Gene3D - 278 345 IPR036638 GO:0046983
Viun3g03641 373 MobiDBLite consensus disorder prediction 254 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03641 Viun-Chr3 43293924 43297513 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03641 232 368 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 49.306 1.35e-33 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03641 - - vum:124832810 652.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g03641 3 43293924 43297513 Viun3g03641 3 43293924 43297513 ECH