Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03631 ATGTCAACGGAAGCGCCCAAGCGCCATAAATGGCAGTGGGAGAACGCCACCGCGGGCGCCGCCGCCGGATTCGCCACCGTTGCCGTTATGTATCCCCTCGATGTTGTCCGCACTAGGTTCCAAGTTAACGATGGTCGAGTCTCTCATCTTCCCAGTTACAAGAACACCGCTCACGCCGTTTTGACCATTGCTCGCTCCGAGGGATTAAGAGGGTTATATGCAGGCTTTCTTCCTGGGACTCTCGGATCCACTATTTCGTGGGGCTTATATTTCTTTTTCTATGATAAAGCCAAACAAAGATATGCAAGGAGTGGGGAGGGAAAATTGAGTCCAGGTCTTCATCTTGCCTCAGCTGCTGAAGCAGGAGGTTTGGTTTGCCTGTGTACAAATCCTGTTTGGCTTGTAAAGACAAGATTGCAGCTTCAAAGTCCGCTTCATCAGACGCAACCATACTCTGGGCTTTTTGATGCTTTTAGGACCATAACGAGGGAAGAGGGATTTAGTGCACTTTACAGAGGCATTGTTCCTGGTCTATTGCTGGTGTCTCATGGTGCTATTCAGTTTACAGCATACGAGGAGCTCCGTAAAGTTATTATTGATTTTAAGAGTAAGAGAAGTACATTCCATAATCAAAATCCTGATAAATTGTTGAATTCTGTTGATTATGCTGTTCTTGGAGCAACATCAAAACTGGCTGCAATACTGCTAACCTATCCATTTCAGGTTATGCGGTCTCGCTTGCAGCAACGACCTAGTGGTGATGGGGTCCCAAGATATATGGATACTTGGCATGTTGTGAAAGAAACTGCACGATTTGAAGGTATCCGGGGCTTTTACAAAGGAATTACCGCAAACCTCTTGAAAAATGCTCCTGCTTCTTCAATAACATTTATTGTTTATGAAAATGTTTTAAAATTGCTTAAACCGACAATAAGGAATGACTGA 945 0.4476 MSTEAPKRHKWQWENATAGAAAGFATVAVMYPLDVVRTRFQVNDGRVSHLPSYKNTAHAVLTIARSEGLRGLYAGFLPGTLGSTISWGLYFFFYDKAKQRYARSGEGKLSPGLHLASAAEAGGLVCLCTNPVWLVKTRLQLQSPLHQTQPYSGLFDAFRTITREEGFSALYRGIVPGLLLVSHGAIQFTAYEELRKVIIDFKSKRSTFHNQNPDKLLNSVDYAVLGATSKLAAILLTYPFQVMRSRLQQRPSGDGVPRYMDTWHVVKETARFEGIRGFYKGITANLLKNAPASSITFIVYENVLKLLKPTIRND 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03631 314 Pfam Mitochondrial carrier protein 109 199 IPR018108 -
Viun3g03631 314 Pfam Mitochondrial carrier protein 11 102 IPR018108 -
Viun3g03631 314 Pfam Mitochondrial carrier protein 220 308 IPR018108 -
Viun3g03631 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 100 IPR018108 -
Viun3g03631 314 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 12 309 IPR044712 GO:0006862|GO:0055085
Viun3g03631 314 FunFam Folate transporter 1, chloroplastic 106 312 - -
Viun3g03631 314 FunFam folate transporter 1, chloroplastic isoform X1 1 105 - -
Viun3g03631 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 197 IPR018108 -
Viun3g03631 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 217 306 IPR018108 -
Viun3g03631 314 SUPERFAMILY Mitochondrial carrier 11 302 IPR023395 -
Viun3g03631 314 PRINTS Mitochondrial carrier protein signature 73 91 IPR002067 GO:0055085
Viun3g03631 314 PRINTS Mitochondrial carrier protein signature 25 43 IPR002067 GO:0055085
Viun3g03631 314 Gene3D Mitochondrial carrier domain 107 309 IPR023395 -
Viun3g03631 314 Gene3D Mitochondrial carrier domain 2 106 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03631 Viun-Chr3 43215430 43222517 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03631 32 307 Chloroplast and Mitochondria Gene Families AT2G47490 37.809 1.62e-48 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03631 K15115 - gmx:100809599 560.451