Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03623 ATGTGTAACCCCACTCTCATTTATAAGGAAGGACAAAAAGAAGTTTCTTCAAAACATTCAATACCTCTTCTCTCTCTCTTTTTTTTTTTCCCTTTCTTTCTTCACCTCAATACACTCTGCATGATTCTGTGTGACATGGAATGGATCATTGGACTATGGAGTCTCATGGGTATCATCCTCACATGGTGCTGCTACTGGTTTCTCTGTGTCAAAAAGGACAACGGTAACAGGGTCAAACAGAAGAAGAAGAAGAAGGGGAAAGTTCCCAGAGGAAACAAAGGTTGGCCTTTACTCGGAGAGACCCTTGAGTTCATTGCTTGTGGCTACACCTCCAACCCTGTCAGCTTCATGGAAAAACGCAAGTCTCTGTATGGTAGTGTATTTAAGACAAGCATTTTGGGAACTGGTGTGATTGTGTCGACAGACCCAGAAGTGAACAAGGTGATTCTGCAGAACCAGGGGAACATATTCGTCCCTGCTTATCCAAAATCGGTGAGAGAACTAATGGGAGACTACTCCATCCTCCAAATGAACGGGAACATGCATAGGAAAATTCATTCACTTCTTGGAGGCTTCCTACGATCCCCTCAATTCAAAGCTCGAATCACTGCAGATATTCAACACTCTGTTAAACAATGCTTTGCAACTTGGATCCACCAACCAATTTACGTTCAAGATCAAGTCAAAAAGATCACATTCACTATTCTGGTTAAAGTTCTGCTTAGCATTGGTCCCGGTGAAGATTTAGACTTCTTGAAGAGAGAATTTGAAGAGTTCATAAAAGGGTTGATTTGCTTACCCCTCAAGTTTCCTGGGACAAGACTATATAAATCCCTGAAGGCTAAGGAAAGAATGATGAAGATAGTGAAGAGGGTAATAGAGGAAAGGAACAATAATATCCATAACAAGAAGAATACAGAAGAGAAGGGAGGTGCAGTAAATGATGTGGTGGATGTGCTATTAAGGGATATTGGTGATAGCAACACTATCTCTAACATGTTGGAAAATATCTGTGAGAACATAATTGAGATGATGATCCCTGGGGAGGAGACTCTTCCCACGGCTATGACCATGGCTGTCAAATTTCTCAGTGACTCTCCCCTTGCCCTATCCAAATTACTGGAAGAGAACATGGAATTGAAGAGGCAGAAGAATTGTGCAGAGGATTATGTGTGGAGTGACTACCTTCAGCTGCCATTTACACAAAATGTTATCAGCGAAACTCTAAGAATGGCAAATATTGTGAATGCCATTTGGAGAAAAGCAGTCAAAGACGTTGAAATCAAAGGGTATTTGATTCCAAAGGATTGGTGTGTTGTGGCATCTCTTAGTTCTGTTCATATGGATAACATGAATTACGAAAACCCTTTTAAGTTTGATCCTTGGAGATGGGAGAAAAGTGGAGGTGGAGCTAATAACAATTGGTTTACACCATTTGGTGGTGGACAGAGACTGTGCCCTGGCATAGAACTCTCTAGGCTAGAGCTCTCTATCTTCCTTCACCATCTTGTTACCACTTACAGATGGGTTGCTGAGAAGGATGAAATAATCTACTTTCCAACCGTGAAGATGAAGAGGAAGCTCCCAATCAGTGTAACAAGCATTAACAGCTAA 1614 0.4145 MCNPTLIYKEGQKEVSSKHSIPLLSLFFFFPFFLHLNTLCMILCDMEWIIGLWSLMGIILTWCCYWFLCVKKDNGNRVKQKKKKKGKVPRGNKGWPLLGETLEFIACGYTSNPVSFMEKRKSLYGSVFKTSILGTGVIVSTDPEVNKVILQNQGNIFVPAYPKSVRELMGDYSILQMNGNMHRKIHSLLGGFLRSPQFKARITADIQHSVKQCFATWIHQPIYVQDQVKKITFTILVKVLLSIGPGEDLDFLKREFEEFIKGLICLPLKFPGTRLYKSLKAKERMMKIVKRVIEERNNNIHNKKNTEEKGGAVNDVVDVLLRDIGDSNTISNMLENICENIIEMMIPGEETLPTAMTMAVKFLSDSPLALSKLLEENMELKRQKNCAEDYVWSDYLQLPFTQNVISETLRMANIVNAIWRKAVKDVEIKGYLIPKDWCVVASLSSVHMDNMNYENPFKFDPWRWEKSGGGANNNWFTPFGGGQRLCPGIELSRLELSIFLHHLVTTYRWVAEKDEIIYFPTVKMKRKLPISVTSINS 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03623 537 SUPERFAMILY Cytochrome P450 84 532 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g03623 537 Gene3D Cytochrome P450 77 536 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g03623 537 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 479 488 IPR017972 GO:0005506|GO:0016705
Viun3g03623 537 Pfam Cytochrome P450 89 514 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g03623 537 FunFam 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 78 535 - -
Viun3g03623 537 PANTHER CYTOCHROME P450 26 85 510 - -
Viun3g03623 537 PRINTS E-class P450 group I signature 442 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g03623 537 PRINTS E-class P450 group I signature 476 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g03623 537 PRINTS E-class P450 group I signature 121 140 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g03623 537 PRINTS E-class P450 group I signature 486 509 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g03623 537 PRINTS E-class P450 group I signature 336 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g03623 537 PRINTS E-class P450 group I signature 402 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g03623 537 Coils Coil 370 390 - -
Viun3g03623 537 CDD CYP90-like 120 533 - -
Viun3g03623 537 PRINTS P450 superfamily signature 486 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g03623 537 PRINTS P450 superfamily signature 403 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g03623 537 PRINTS P450 superfamily signature 347 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g03623 537 PRINTS P450 superfamily signature 477 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03623 Viun-Chr3 42939771 42946413 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03623 87 508 Cytochrome P450 AT3G13730 53.538 8.01e-164 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03623 K12637 - gmx:100812489 836.639