Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03622 ATGTGTAACCCCACTCTCATTTATAAGGAAGGACAAAAAGAAGTTTCTTCAAAACATTCAATACCTCTTCTCTCTCTCTTTTTTTTTTTCCCTTTCTTTCTTCACCTCAATACACTCTGCATGATTCTGTGTGACATGGAATGGATCATTGGACTATGGAGTCTCATGGGTATCATCCTCACATGGTGCTGCTACTGGTTTCTCTGTGTCAAAAAGGACAACGGTAACAGGGTCAAACAGAAGAAGAAGAAGAAGGGGAAAGTTCCCAGAGGAAACAAAGGTTGGCCTTTACTCGGAGAGACCCTTGAGTTCATTGCTTGTGGCTACACCTCCAACCCTGTCAGCTTCATGGAAAAACGCAAGTCTCTGTATGGTAGTGTATTTAAGACAAGCATTTTGGGAACTGGTGTGATTGTGTCGACAGACCCAGAAGTGAACAAGGTGATTCTGCAGAACCAGGGGAACATATTCGTCCCTGCTTATCCAAAATCGGTGAGAGAACTAATGGGAGACTACTCCATCCTCCAAATGAACGGGAACATGCATAGGAAAATTCATTCACTTCTTGGAGGCTTCCTACGATCCCCTCAATTCAAAGCTCGAATCACTGCAGATATTCAACACTCTGTTAAACAATGCTTTGCAACTTGGATCCACCAACCAATTTACGTTCAAGATCAAGTCAAAAAGATCACATTCACTATTCTGGTTAAAGTTCTGCTTAGCATTGGTCCCGGTGAAGATTTAGACTTCTTGAAGAGAGAATTTGAAGAGTTCATAAAAGGGTTGATTTGCTTACCCCTCAAGTTTCCTGGGACAAGACTATATAAATCCCTGAAGGCTAAGGAAAGAATGATGAAGATAGTGAAGAGGGTAATAGAGGAAAGGAACAATAATATCCATAACAAGAAGAATACAGAAGAGAAGGGAGGTGCAGTAAATGATGTGGTGGATGTGCTATTAAGGGATATTGGTGATAGCAACACTATCTCTAACATGTTGGAAAATATCTGTGAGAACATAATTGAGATGATGATCCCTGGGGAGGAGACTCTTCCCACGGCTATGACCATGGCTGTCAAATTTCTCAGTGACTCTCCCCTTGCCCTATCCAAATTACTGGAAGAGAACATGGAATTGAAGAGGCAGAAGAATTGTGCAGAGGATTATGTGTGGAGTGACTACCTTCAGCTGCCATTTACACAAAATGTTATCAGCGAAACTCTAAGAATGGCAAATATTGTGAATGCCATTTGGAGAAAAGCAGTCAAAGACGTTGAAATCAAAGGGTATTTGATTCCAAAGGATTGGTGTGTTGTGGCATCTCTTAGTTCTGTTCATATGGATAACATGAATTACGAAAACCCTTTTAAGTTTGATCCTTGGAGATGGGAGAAAAGTGGAGGTGGAGCTAATAACAATTGGTTTACACCATTTGGTGGTGGACAGAGACTGTGCCCTGGCATAGAACTCTCTAGGCTAGAGCTCTCTATCTTCCTTCACCATCTTGTTACCACTTACAGTTTGTACTCTGCAGATGGGTTGCTGAGAAGGATGAAATAA 1563 0.4146 MCNPTLIYKEGQKEVSSKHSIPLLSLFFFFPFFLHLNTLCMILCDMEWIIGLWSLMGIILTWCCYWFLCVKKDNGNRVKQKKKKKGKVPRGNKGWPLLGETLEFIACGYTSNPVSFMEKRKSLYGSVFKTSILGTGVIVSTDPEVNKVILQNQGNIFVPAYPKSVRELMGDYSILQMNGNMHRKIHSLLGGFLRSPQFKARITADIQHSVKQCFATWIHQPIYVQDQVKKITFTILVKVLLSIGPGEDLDFLKREFEEFIKGLICLPLKFPGTRLYKSLKAKERMMKIVKRVIEERNNNIHNKKNTEEKGGAVNDVVDVLLRDIGDSNTISNMLENICENIIEMMIPGEETLPTAMTMAVKFLSDSPLALSKLLEENMELKRQKNCAEDYVWSDYLQLPFTQNVISETLRMANIVNAIWRKAVKDVEIKGYLIPKDWCVVASLSSVHMDNMNYENPFKFDPWRWEKSGGGANNNWFTPFGGGQRLCPGIELSRLELSIFLHHLVTTYSLYSADGLLRRMK 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03622 520 FunFam 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 78 516 - -
Viun3g03622 520 SUPERFAMILY Cytochrome P450 84 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g03622 520 PRINTS P450 superfamily signature 477 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g03622 520 PRINTS P450 superfamily signature 486 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g03622 520 PRINTS P450 superfamily signature 403 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g03622 520 PRINTS P450 superfamily signature 347 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g03622 520 CDD CYP90-like 120 508 - -
Viun3g03622 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 479 488 IPR017972 GO:0005506|GO:0016705
Viun3g03622 520 PRINTS E-class P450 group IV signature 447 465 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g03622 520 PRINTS E-class P450 group IV signature 470 486 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g03622 520 PRINTS E-class P450 group IV signature 398 414 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g03622 520 PRINTS E-class P450 group IV signature 115 138 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g03622 520 PRINTS E-class P450 group IV signature 486 504 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g03622 520 PANTHER CYTOCHROME P450 26 85 507 - -
Viun3g03622 520 Pfam Cytochrome P450 89 509 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g03622 520 Gene3D Cytochrome P450 77 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g03622 520 Coils Coil 370 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03622 Viun-Chr3 42939769 42946638 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03622 87 507 Cytochrome P450 AT3G13730 53.428 5.46e-163 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03622 K12637 - gmx:100812489 781.941