Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03612 ATGGATTTACTCCTGCAACTGAAAACCGTACTCCAACCGTTCCACACGACGATCTTGTTCATAATCCCGGTGACGTTAGTGCTGTGGTGTTTACTGTCTCGAATCCGCAGAAAAACGGCGCCGTATCCCCCGGGGCCTAAAGGCCTTCCCATCATAGGGAACATGAACATGATGGACCAGCTCACACACAGAGGCCTGGCCAAACTCGCCAAGCAATACGGCGGCGTTTTGCACCTCCGAATAGGGTTCCTCCCCATGGTTGCCATTTCAAACGCGGAAGCGGCGCGTGAAGTGCTCCAAGTCCAGGACAATATATTCTCCAACCGCCCTGCCACCATAGCCATCAGGTACCTAACCTACGACCGCGCCGACATGGCTTTCGCTCACTACGGTCCCTTCTGGCGCCAGATGCGCAAAATCTGCGTCATGAAACTCTTCAGCCGCAAGCGCGCCGAGTCCTGGAACTCCGTCAGAGACGAAGTCGACACCATCGTCCGCACCGTTGCGGCGAACGTGGGCAACCCCGTTAATGTGGGGGAACTGGTGTTTAACCTCACGAAAAACATCATCTACCGCGCCGCTTTCGGGTCCAGTTCCCGACAGGGACAGGACAAGTTCATTTCAATTCTTCAGGAGTTTTCCAAGTTGTTTGGGGCCTTCAATATTGCGGACTTTGTGCCTTGTCTCGGGTGGGTTGATCCTCAGGGTCTGAACTTGAGACTCGTCCAGGCACGCGCCGCCTTGGATAGCTTCATTGATAACATCATTGAGGAGCACGTGGAGAAGAAGAGGAGCGGCAAGTGCTGTGAGGATGAAAGTGACATGGTTGATGAGTTGCTGAATTTTTACAGCCAAAACCAAAACCCCAGTTTCAGTAATGAATCAAACGACTTGCATAACTCCATCACACTCACCAAAGACAACATCAAAGCCATCATCATGGACGTGATGTTCGGAGGGACCGAAACGGTGGCATCAGGAATTGAGTGGGCAATGGCGGAGCTAATGAGAAGCCCAGAAGACCTACGGCGCGTGCACCAAGAACTAGCCGACGTAGTGGGCCTGGACCGGCGCGTGGAGGAATCGGACCTCGAAAAGCTCGTCTTTCTGAAATGCGCGGTGAAGGAGACGCTGCGGTTGCACCCGCCGATTCCGCTTCTCCTCCACGAGACGGCGGAGGAAGCGGTGGTTTGCGGGTACCACGTGCCGAAGGGTTCGCGCGTGATGATAAACGCGTGGGCCATTGGAAGGAACGGGGACTCGTGGGAGGAGCCGGAAGCGTTCAAGCCGTCGCGGTTTCTGGATCCGACCGTGCCGGATTTCAAAGGGAGCAACTTTGAGTTCATTCCGTTCGGGTCGGGTCGGAGATCCTGTCCCGGAATGCAACTGGGGCTTTACGCGCTGGAAGTGGCCGTGGCGCACTTGCTTCACTGCTTCACGTGGGAATTACCCGATGGGATGAAACCCAGCGAGTTGGACATGAGTGACGTGTTCGGACTCACCGCGCCGATGGCGAGTCGACTCGTGGCGATTCCATCCAAACGTGTGTTATGTCCTTTATAA 1563 0.5509 MDLLLQLKTVLQPFHTTILFIIPVTLVLWCLLSRIRRKTAPYPPGPKGLPIIGNMNMMDQLTHRGLAKLAKQYGGVLHLRIGFLPMVAISNAEAAREVLQVQDNIFSNRPATIAIRYLTYDRADMAFAHYGPFWRQMRKICVMKLFSRKRAESWNSVRDEVDTIVRTVAANVGNPVNVGELVFNLTKNIIYRAAFGSSSRQGQDKFISILQEFSKLFGAFNIADFVPCLGWVDPQGLNLRLVQARAALDSFIDNIIEEHVEKKRSGKCCEDESDMVDELLNFYSQNQNPSFSNESNDLHNSITLTKDNIKAIIMDVMFGGTETVASGIEWAMAELMRSPEDLRRVHQELADVVGLDRRVEESDLEKLVFLKCAVKETLRLHPPIPLLLHETAEEAVVCGYHVPKGSRVMINAWAIGRNGDSWEEPEAFKPSRFLDPTVPDFKGSNFEFIPFGSGRRSCPGMQLGLYALEVAVAHLLHCFTWELPDGMKPSELDMSDVFGLTAPMASRLVAIPSKRVLCPL 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03612 520 PANTHER CYTOCHROME P450 84A1-RELATED 12 520 - -
Viun3g03612 520 FunFam Cytochrome P450 84A1 35 514 - -
Viun3g03612 520 Pfam Cytochrome P450 43 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g03612 520 CDD CYP71-like 72 508 - -
Viun3g03612 520 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g03612 520 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g03612 520 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g03612 520 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g03612 520 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g03612 520 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g03612 520 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g03612 520 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g03612 520 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g03612 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
Viun3g03612 520 Gene3D Cytochrome P450 35 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g03612 520 SUPERFAMILY Cytochrome P450 43 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g03612 520 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g03612 520 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g03612 520 PRINTS P450 superfamily signature 458 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g03612 520 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03612 Viun-Chr3 42820636 42823885 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03612 50 520 Monolignol Biosynthesis Gene Families AT4G36220 72.211 0.0 732