Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03595 ATGGCGAGGGAAGATGGGGGAGCTAAGGATGTTGGCATAACTAACCCAACTAACAAAACACTCACACCTTACTCTCTTCTTCCCTTCACTACCATGACTAAATTTCTCATCCTACTGTTATTGTGCGCACGCTTCTTATCATGCGCCCACTGCGCCTCCGTCACCGAGATCCAAGCCTTAACGTCGTTCAAGCTCAACCTTCACGACCCTCTCGGCGCGCTTAACGGCTGGGACCCATCTACGCCGTTAGCTCCATGCGACTGGCGCGGGGTTTCTTGCAAGAACGACCGAGTCACCGAGTTACGCCTGCCTCGCCTTCAACTCAGTGGCCAACTTGGTGACCGCATTTCAGACCTACGCATGCTTCGAAGGCTAAGCCTTCGCTCCAACTCCTTCAACGGCACAATTCCCCAATCCCTCTCCAAATGCACGCTCCTACGCGCCTTGTTCCTACAGTATAACGACCTCTCCGGCCAACTCCCGCCGGAGATCGGTAACCTCGCCGCTCTCCAGATTCTCAACGTCGCCGGCAACAACCTCTCTGGGGAAATCCCCGCAGAACTTCCCCTCCATCTCAAGTACGTTGACCTCTCCGCCAACGCCTTCTCCGGCGAGATTCCGACCACCATCGCCGTTCTTTCCGAGCTTCAGCTTATCAACCTCTCCTACAACAAGTTCTCGGGCCAGATTCCGGCGCGCATTGGAGAGCTTCAGAATCTGCAATACCTTTGGCTCGATCACAATGTTCTCGGCGGAACCTTACCTTCGTCTCTCGCGAATTGTTCCTCGCTCGTGCATTTGAGCGTCGAAGGGAACGCGCTCGCCGGCGTGTTACCGGCTGCGATTGCGGCTCTCCCGAACCTCCAGGTGTTGGCGCTCGCGCAGAACAACTTCACCGGCGCCGTTCCGGCTTCTGTTTTCTGCAACGTGTCGCTGAAAGCGCCGTCACTGCGCATCGTCCAGTTAGGGTTTAACCGTTTCACGGATTTCGCGTGGCCTCAAGCCGCCACGTGTTTCAGTGTTCTTGAGGTTTTGGATATACAGCAAAATGGCGTGCGCGGCATGTTTCCATTGTGGCTAACCAACGTGACCACGTTGTCGGTTCTCGATATTTCCGGTAACGCACTTTCCGGCGAGGTTCCGCCGGAAGTTGGAAATCTCTGGAAATTGGTAGAGCTGAAGATAGCCAATAATTCATTCTCAGGCGAGATTCCGCCGGAATTAGTAAAATGTAGGTCCCTGCGTTTTGTTGATTTTGAAGGAAACCGGTTTTCCGGTGAGGTTCCTTCGTTTATAGGAAATCTGACGGCGCTGAAGGTTCTGTCTCTTGGTGTGAACCATTTCTCTGGTTCTGTTCCGGTGAGTTTTGGTGGGCTTGTTTCTCTTGAAACTTTGAGTTTAAGAGGTAATAGATTGAATGGTTCAATGCCAGAGGAAGTGATGGGGTTGAAGAATTTGACAGTGTTGGACCTCAGTGGAAACCAGTTTTCGGGTCATGTTTCTGGGGAAATTGGGAATCTGAGTAAGTTAATGGTTCTGAATCTGAGTGGTAATGGCTTCTATGGAGAAATTCCTTCCACATTGGGGAATCTTTTCAGGCTCACAACACTTGATTTGAGCAAACAAAATCTCTCCGGTAAATTGCCATATGAAATTTCGGGGCTTCCCAGTTTGCAGATCATTGCTCTTCAAGAGAACAAGTTGTCTGGGGTGATCCCTGAAGGGTTTAGCAGCTTGACCAGTTTGAAATACGTGAACCTAAGCTCTAACGAGTTTTCTGGGCATGTTCCCAAGAGCTATGGCTTTCTCCGATCTTTGGCTGTTCTTTCATTGTTGAATAACCGAATCACGGGAATGATTCCCCCGGAAATTGGAAACTGCCCTGACATTGAAATTCTCGAGCTTAGATCAAATTACTTCAGGGGTCCCATTCCCGCGGATCTCTCTGGCCTAGTCCATTTGAAAGTCCTTGATTTAGGTAAGAACAACTTAACTGGGGCTTTGCCTGAGGATATCTCCAAATGCTCAGAGTTAACCGTTGTCTTAGCAGATCACAACCAACTTTCGGGTGCTATACCAGGGTCATTGGCCAAGTTATCACACCTAACTGTGCTGGATCTTTCTGCCAATAAATTGAGTGGCGAAATCCCCAGTAATCTAAACACCATCCCCGGTTTGGTGTTCTTCAATGTCTCAGGCAACAACTTAGAAGGTGAGATTCCAGCTATGCTGGGTTCTAAATTCAACGACTCCTCTGTATTTGCAAGTAACCAGAACTTGTGCGGGAAACCATTGGATAGAAAGTGCGAAGCGACGGACAATAGTGAGAGAAATAGGTCGATAGTGTTAATCATTATCATCGCGGTTGGAGCTTGCTTATTGGCATTGTGTTGCTGCTTCTACATCTCCAGCCTTCTGAGATGGCGCAGAAGGATTAAAGCAGCAGTGTCGGGAGAGAAGAAAAAGAGTCCAAGAACAAGTTCAGGAACAAGTCAAGGTCGAAGCAGCACTGACACCAACGGACCAAGACTCGTCATGTTCAACGCCAAAATCACACTCGCCGAAACAGTCGAAGCAACAAGGCAATTCGATGAAGAAAACGTGCTAAGCAGAACAAGACACGGTTTAGTATTCAAGGCCTGTTACAACGACGGAATGGTCCTTTCCATTCGCAAGCTCCCAGACGGGTTACTACTAGACGAAAACATGTTCAGAAAAGAAGCCGAGTCGTTAGGAAAAATTAGGCACCGGAACCTAACAGTTCTCAGAGGCTACTATGCAGGCCCATCGGATGTTAGACTCTTGGTGTACGATTACATGCCAAATGGGAACCTCGCAACATTGCTCCAAGAAGCATCACACCTAGATGGTCACGTTCTGAATTGGCCAATGCGACACCTCATTGCATTAGGAATAGCCCGTGGCATAGCGTTTCTACACCAATCCTCACTTATCCACGGTGACATCAAACCCCAAAGCGTGCTCTTTGATGCAGACTTCGAAGCCCATTTATCAGATTTCGGGTTGGACAAGTTAACAGTTACCAACCCAGTTGAAGCCTCCACTTCAAGCACTGCTTCAGTTGGGACGTTGGGTTACGTGTCCCCTGAGGCTGTGCTAACAGGGGAACCCACGAAAGAGTGTGACGTGTACAGCTTCGGCATCGTTTTGCTGGAACTTCTCACTGGGAAGAGACCAGTGATGTTCACGCAGGATGAGGATATAGTGAAGTGGGTGAAGAAACAGTTACAGAACGGTCAAATTACAGAGCTACTAGAGCCTGGTTTGTTTGAACTTGACCCAGAGTCTTCCGAATGGGAAGAGTTCTTACTGGGTGTGAAAGTTGGCCTGCTTTGCACAGCCCCAGACCCTCTTGATCGACCAACCATGGCTGACATCGTCTTCATGCTCGAAGGTTGTCGTGTTGGACCCGATATTGCATCCTCCGCTGAACCCACCACACAACCTTCTCCCGTGTAA 3480 0.4937 MAREDGGAKDVGITNPTNKTLTPYSLLPFTTMTKFLILLLLCARFLSCAHCASVTEIQALTSFKLNLHDPLGALNGWDPSTPLAPCDWRGVSCKNDRVTELRLPRLQLSGQLGDRISDLRMLRRLSLRSNSFNGTIPQSLSKCTLLRALFLQYNDLSGQLPPEIGNLAALQILNVAGNNLSGEIPAELPLHLKYVDLSANAFSGEIPTTIAVLSELQLINLSYNKFSGQIPARIGELQNLQYLWLDHNVLGGTLPSSLANCSSLVHLSVEGNALAGVLPAAIAALPNLQVLALAQNNFTGAVPASVFCNVSLKAPSLRIVQLGFNRFTDFAWPQAATCFSVLEVLDIQQNGVRGMFPLWLTNVTTLSVLDISGNALSGEVPPEVGNLWKLVELKIANNSFSGEIPPELVKCRSLRFVDFEGNRFSGEVPSFIGNLTALKVLSLGVNHFSGSVPVSFGGLVSLETLSLRGNRLNGSMPEEVMGLKNLTVLDLSGNQFSGHVSGEIGNLSKLMVLNLSGNGFYGEIPSTLGNLFRLTTLDLSKQNLSGKLPYEISGLPSLQIIALQENKLSGVIPEGFSSLTSLKYVNLSSNEFSGHVPKSYGFLRSLAVLSLLNNRITGMIPPEIGNCPDIEILELRSNYFRGPIPADLSGLVHLKVLDLGKNNLTGALPEDISKCSELTVVLADHNQLSGAIPGSLAKLSHLTVLDLSANKLSGEIPSNLNTIPGLVFFNVSGNNLEGEIPAMLGSKFNDSSVFASNQNLCGKPLDRKCEATDNSERNRSIVLIIIIAVGACLLALCCCFYISSLLRWRRRIKAAVSGEKKKSPRTSSGTSQGRSSTDTNGPRLVMFNAKITLAETVEATRQFDEENVLSRTRHGLVFKACYNDGMVLSIRKLPDGLLLDENMFRKEAESLGKIRHRNLTVLRGYYAGPSDVRLLVYDYMPNGNLATLLQEASHLDGHVLNWPMRHLIALGIARGIAFLHQSSLIHGDIKPQSVLFDADFEAHLSDFGLDKLTVTNPVEASTSSTASVGTLGYVSPEAVLTGEPTKECDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQNGQITELLEPGLFELDPESSEWEEFLLGVKVGLLCTAPDPLDRPTMADIVFMLEGCRVGPDIASSAEPTTQPSPV 1159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03595 1159 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 498 773 - -
Viun3g03595 1159 MobiDBLite consensus disorder prediction 817 842 - -
Viun3g03595 1159 SUPERFAMILY RNI-like 427 771 - -
Viun3g03595 1159 Pfam Leucine Rich Repeat 653 675 IPR001611 GO:0005515
Viun3g03595 1159 MobiDBLite consensus disorder prediction 821 842 - -
Viun3g03595 1159 Pfam Protein kinase domain 875 1133 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g03595 1159 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 46 577 - -
Viun3g03595 1159 SUPERFAMILY Protein kinase-like (PK-like) 844 1144 IPR011009 -
Viun3g03595 1159 FunFam Putative LRR receptor-like serine/threonine-protein kinase 826 939 - -
Viun3g03595 1159 ProSiteProfiles Protein kinase domain profile. 863 1146 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g03595 1159 Gene3D Ribonuclease Inhibitor 51 190 IPR032675 -
Viun3g03595 1159 Pfam Leucine rich repeat N-terminal domain 56 93 IPR013210 -
Viun3g03595 1159 SMART LRR_sd22_2 459 482 - -
Viun3g03595 1159 SMART LRR_sd22_2 483 509 - -
Viun3g03595 1159 SMART LRR_sd22_2 237 260 - -
Viun3g03595 1159 SMART LRR_sd22_2 699 722 - -
Viun3g03595 1159 SMART LRR_sd22_2 651 674 - -
Viun3g03595 1159 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 940 1145 - -
Viun3g03595 1159 SUPERFAMILY RNI-like 99 426 - -
Viun3g03595 1159 SMART LRR_typ_2 285 309 IPR003591 -
Viun3g03595 1159 SMART LRR_typ_2 699 723 IPR003591 -
Viun3g03595 1159 SMART LRR_typ_2 119 143 IPR003591 -
Viun3g03595 1159 SMART LRR_typ_2 555 578 IPR003591 -
Viun3g03595 1159 SMART LRR_typ_2 363 387 IPR003591 -
Viun3g03595 1159 SMART LRR_typ_2 651 675 IPR003591 -
Viun3g03595 1159 SMART LRR_typ_2 459 482 IPR003591 -
Viun3g03595 1159 SMART LRR_typ_2 603 627 IPR003591 -
Viun3g03595 1159 SMART LRR_typ_2 167 191 IPR003591 -
Viun3g03595 1159 SMART LRR_typ_2 507 531 IPR003591 -
Viun3g03595 1159 SMART LRR_typ_2 483 506 IPR003591 -
Viun3g03595 1159 SMART LRR_typ_2 237 261 IPR003591 -
Viun3g03595 1159 SMART LRR_typ_2 435 458 IPR003591 -
Viun3g03595 1159 Gene3D Phosphorylase Kinase; domain 1 826 939 - -
Viun3g03595 1159 FunFam Uncharacterized protein 285 497 - -
Viun3g03595 1159 Gene3D Ribonuclease Inhibitor 411 483 IPR032675 -
Viun3g03595 1159 Gene3D Ribonuclease Inhibitor 331 410 IPR032675 -
Viun3g03595 1159 Pfam Leucine rich repeat 533 591 IPR001611 GO:0005515
Viun3g03595 1159 Pfam Leucine rich repeat 417 472 IPR001611 GO:0005515
Viun3g03595 1159 Gene3D Ribonuclease Inhibitor 191 330 IPR032675 -
Viun3g03595 1159 Gene3D Ribonuclease Inhibitor 484 773 IPR032675 -
Viun3g03595 1159 Gene3D Transferase(Phosphotransferase) domain 1 940 1148 - -
Viun3g03595 1159 Pfam Leucine Rich repeat 699 715 IPR001611 GO:0005515
Viun3g03595 1159 FunFam Inactive leucine-rich repeat receptor-like protein kinase 190 280 - -
Viun3g03595 1159 FunFam Putative LRR receptor-like serine/threonine-protein kinase 54 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03595 Viun-Chr3 42728695 42732539 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03595 35 1159 Receptor kinase-like Gene Family AT4G36180 65.845 0.0 1459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Viun3g03595 Pkinase 5.4e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03595 - - vun:114175753 2234.14