Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03582 ATGGCCATAAGAAAATCCACGAAGCTACCCCAAGCAGAAGTGATAAAGCAAATAGTGAGAAGGTGTTCAAGTTTTGGAAAGAAACATGGGTACGATGAAGAGGGTCTTCCTGAGGATGTTCCAAAAGGGCACTTTGCAGTGTATGTTGGTGAAAACAGGACAAGATATATTGTCCCAATTTCATGGTTGGCTCATCCACAGTTTCAAACTCTTCTCCAAAGAGCTGAAGAGGAATTTGGCTTCAATCATGACATGGGTCTTACCATCCCATGTGATGAACTGGTTTTTGAGTTTCTTACCTCAATGATTAGGTCATAA 318 0.4119 MAIRKSTKLPQAEVIKQIVRRCSSFGKKHGYDEEGLPEDVPKGHFAVYVGENRTRYIVPISWLAHPQFQTLLQRAEEEFGFNHDMGLTIPCDELVFEFLTSMIRS 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03582 105 Pfam Auxin responsive protein 27 103 IPR003676 GO:0009733
Viun3g03582 105 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 37 101 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03582 Viun-Chr3 42580511 42581350 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03582 37 105 Calmodulin-binding Proteins AT3G43120 49.275 9.18e-21 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03582 K14488 - gmx:100500218 196.052