Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03566 ATGGAGGCTGAGGCGCAAATCTCTCACGATTCAAATACTCAATTTCAGCCAGAGCCTGTTGTCTCAGTTCAAAATGGGGATCCTGGTGTTTCCTCATCTGTGGCAAATGTTGTTATTCCTCAGCAGCCAGCTACAAAAAAACCAACCAGGCAGTGGGCTGCGTGGACTCGACAAGAGGAGGAGAGTTTCTTCACTGCATTGCGACAAGTTGGGAAGAATTTTGAGAAAATCACTTCCCGTGTACAAAGTAAAAACAAGGATCAGGTCAGGCATTATTACTACCGGCTTGTGAGGCGGATGAACAAACTTCTTGGTCCAGGACTATGTTTGGATGCCAAAAACTCTAAAGATACTAATGCTGCAATGCTTCGCTGGTGGTCTTTATTGGAAAAGTATAGCTGCAAAGCCTCAAAGCTTCACCTGAAGCCCCGGAGATTTAAAATATTTTTAGAAGCCTTGGAGCATCAACTATTGAAGGACCGAAAGAAGAATGTAAGGAAGCGACCCCTGCAGGGGGGGAATTGTCTTCCTCCTGTGCCTACCACAGTCTCAAATCAGGGTAGAGCATCAGGAAATGAGGCCCGTGCAGTTAAACTGGTTCTTGTTGATAGTCAAAATATTCTAAAATTGGGACCTTCAAAATCATCAATGAAGCGCAATATAAACATGGGTGTTAGCCGTAGTACCACCAAGGGAGATTCAAATACCATGAAATCGACAAGGCAACGAAAGAAATCTGGTATGATTTCAACTGCTGCATATAGGAAATGGGAGAAGGCTGCAATTGCTGGCGTTTCTTTAGTTGCAGATGCTGCAGAGCATTTGGAGCGAGCTGCAACTGTTAGAGAGATTGAACAAGACCAGGAGAATCCAGGAGAAAAATGTTCTGATCCAACTGATTATGTCCTGCCATCTTTACCCTCATGTCCGCAAAATCAATTTGTTGATAACAATGTGAATAGTATGAAACTTAAGCTCCAGTTATTCCCAATCGATGAACCCACTCGAAGAGCATTGGAAGTGGATAAGCATAATCCACACCTGGAGCTTACACTTAGTACTCGAAAGAAGATATCCTCAATTTTGGAACATCTAAACCGTAAATGGGGTCATTCTAGCATAGCGGTTGGAGAATTAATGCTTTTTCCTTATGGTGTTCAAAGGGAAAACTTGTTTAATTATCAGAGATGGACCCAGGAATCTACTCTGAGTGCAGCTGATATTTATGCAATGGTTGGAAGTCCACCCATATTTCGTTTAAGGTATGGTTGGTTCTCCAATTCTGAACTTGGGTTATTAAATATGCAAGTGCCTGTAGCATCCGGCTCCGTCCTCACGCAATCCAAAAGTAGTGTGTATAATTCTAAGGATCAGATTGTGAATTCAGTTTCATTTCCTACGCCATCAGCTAACACTCATTCCATGGAGCTCTCTGAAGGTTGCAGAATATCCATGAACAGAAACCATACTCTCATGACCTCTTCATCTGGTGTGCCCAACACCAGAGGCAACAATGCTTACCTCAATACAAGCTCTGAGGAATCTCGTCGTCCTACAGCCAACACATCGTGGCATGAAAAAGATGTCAGGGATGGAGCTGTAACTACGCAGTTAGAAGACTTGGATGAGTTAAGATTAAGCGGTGGAACAGGACTGTCAGCTGGAGAATGGGCTGACAGTCTTACCAACATTAGCGTGGGGGATCTACTTTCAGGAGTGTCCCAGGATCTCGAAGATGACTGCATCAATCGTCCTATTGCTGAGAATTGTCATGATGTTCAGCAAATTCCTTTTAGTAGCGATTCTTTTGATGCTGCTATTGCTGCTCACATATCTAGACACCAAGACAAGATGGGACAATCGTCGCTGGCAGCCCATATGTCTTCCATCTGGGATGCTGAAGAAACTTGTGATGCCTTTTTATTTCGAAAAGATCCCATTCTTCATGCTGATCGTCCTTGTTTGTCTCCACTTGCTTCTTTTGAGTCCGAGAAAAAGGTTCCTGAAAGAAGCTTTGAGAAATTGGATGAGTTGTCACCTGAAAGGGAGGGGCTTGGGGATGATTTTGTTCAATCAGACCGTATGCCTATGGACAGTTCCGAGTCCGATGCAGATATCCAGGATCATTTAGGAAAGGATTTTAGTGCGCTAGCAGATATATATTGGCCCGATTCCTTGGGACCTTTGGATTTGGATATACCATCATCAACTAAGTACCATACCGGAGATCTAATTTTTAGTGACAGTCTTAGTGGACTGAATCGCTTGATAGCAAGCAGCCTGGATGCATTTCAGAATTGCTCCTTTTTTGGGTTTGACAAGAAGGAAGTACCATCAACAGTTGAGGCTCGAGAATCTGCCACTCTCTCAGATTTTAAAATTGGAAGTGGTATCTGA 2397 0.4335 MEAEAQISHDSNTQFQPEPVVSVQNGDPGVSSSVANVVIPQQPATKKPTRQWAAWTRQEEESFFTALRQVGKNFEKITSRVQSKNKDQVRHYYYRLVRRMNKLLGPGLCLDAKNSKDTNAAMLRWWSLLEKYSCKASKLHLKPRRFKIFLEALEHQLLKDRKKNVRKRPLQGGNCLPPVPTTVSNQGRASGNEARAVKLVLVDSQNILKLGPSKSSMKRNINMGVSRSTTKGDSNTMKSTRQRKKSGMISTAAYRKWEKAAIAGVSLVADAAEHLERAATVREIEQDQENPGEKCSDPTDYVLPSLPSCPQNQFVDNNVNSMKLKLQLFPIDEPTRRALEVDKHNPHLELTLSTRKKISSILEHLNRKWGHSSIAVGELMLFPYGVQRENLFNYQRWTQESTLSAADIYAMVGSPPIFRLRYGWFSNSELGLLNMQVPVASGSVLTQSKSSVYNSKDQIVNSVSFPTPSANTHSMELSEGCRISMNRNHTLMTSSSGVPNTRGNNAYLNTSSEESRRPTANTSWHEKDVRDGAVTTQLEDLDELRLSGGTGLSAGEWADSLTNISVGDLLSGVSQDLEDDCINRPIAENCHDVQQIPFSSDSFDAAIAAHISRHQDKMGQSSLAAHMSSIWDAEETCDAFLFRKDPILHADRPCLSPLASFESEKKVPERSFEKLDELSPEREGLGDDFVQSDRMPMDSSESDADIQDHLGKDFSALADIYWPDSLGPLDLDIPSSTKYHTGDLIFSDSLSGLNRLIASSLDAFQNCSFFGFDKKEVPSTVEARESATLSDFKIGSGI 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03566 798 MobiDBLite consensus disorder prediction 670 704 - -
Viun3g03566 798 Gene3D - 55 120 - -
Viun3g03566 798 MobiDBLite consensus disorder prediction 1 27 - -
Viun3g03566 798 SUPERFAMILY Homeodomain-like 47 101 IPR009057 -
Viun3g03566 798 MobiDBLite consensus disorder prediction 670 689 - -
Viun3g03566 798 Pfam Myb-like DNA-binding domain 54 96 IPR001005 -
Viun3g03566 798 FunFam TSL-kinase interacting protein 1 55 116 - -
Viun3g03566 798 SMART sant 51 99 IPR001005 -
Viun3g03566 798 MobiDBLite consensus disorder prediction 225 247 - -
Viun3g03566 798 MobiDBLite consensus disorder prediction 165 189 - -
Viun3g03566 798 ProSiteProfiles Myb-like domain profile. 47 97 IPR001005 -
Viun3g03566 798 ProSiteProfiles SANT domain profile. 55 101 IPR017884 -
Viun3g03566 798 CDD SANT 54 97 IPR001005 -
Viun3g03566 798 PANTHER CRAMPED PROTEIN 36 771 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03566 Viun-Chr3 42461558 42468641 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Viun3g03566 Myb_DNA-binding 5.8e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03566 - - gmx:100798411 1389.79