Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03550 ATGGGTTCTATTGGAATCAAAAGCTCGGGATCCGAGGTTGTCACCATTGATGTTCATGCAACCAAGGGTTTGATCCAGACCGGTCATGTTTATCTCGATGTCAGGACGGTGGAAGAGTTTCAGAAAGGGCATGTGGATGCTGAGAAGATCATTAACATTCCGTACATGTTTAATACACCAGAAGGTAGGGTGAAGAACCAGGAGTTTCTGAAGGAGGTTTTATCAGCGTGCAAGAAAGAAGATCGCATCATCGTGGGTTGTCAAAGTGGAGTGCGATCTGTGTATGCAACTAGTGATCTTCTGACAGAAGGTTTTAAGGATGTGACCAACATGGGAGGAGGATATCTTGATTGGGTTAAAAATCAATTTCCAGTGAAAACACCTTCGGATTTGGTTAAAGATGAAGTTCCAAAGAAAGTACCTTTGGATTTGGTTAAAAACGAATTGCCATTAAAAACACCATAA 465 0.4172 MGSIGIKSSGSEVVTIDVHATKGLIQTGHVYLDVRTVEEFQKGHVDAEKIINIPYMFNTPEGRVKNQEFLKEVLSACKKEDRIIVGCQSGVRSVYATSDLLTEGFKDVTNMGGGYLDWVKNQFPVKTPSDLVKDEVPKKVPLDLVKNELPLKTP 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03550 154 PANTHER THIOSULFATE SULFURTRANSFERASE 18 7 128 IPR044684 GO:0003824
Viun3g03550 154 Gene3D - 6 127 IPR036873 -
Viun3g03550 154 ProSiteProfiles Rhodanese domain profile. 25 127 IPR001763 -
Viun3g03550 154 CDD RHOD 20 119 - -
Viun3g03550 154 Pfam Rhodanese-like domain 26 120 IPR001763 -
Viun3g03550 154 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 12 125 IPR036873 -
Viun3g03550 154 SMART rhod_4 16 124 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03550 Viun-Chr3 42328321 42330303 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03550 3 127 Sulfurtransferasese or Rhodanese AT5G66170 56.800 8.30e-52 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03550 - K15692 pvu:PHAVU_003G264200g 283.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g03550 3 42328321 42330303 Viun3g03550 3 42328321 42330303 ECH
Viun2g01782 2 27042002 27044418 Viun3g03550 3 42328321 42330303 PCT