Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03539 ATGGCATCGTATGGAAGACACACCATCAAGTTTTTCTATAAGTTGCTTAAACCAAAACTTAGAATGTTCAAAAACAACATTGGAAACAATAGATACAGAAGCATGAGTCTTCTCTGTGGAAAGCTTCTTTCTCAATGGCTTCTAGTCATTCTCATGTTTCAACATGTTTCTGCACTGACCATACCAAACAATGAAACTGTGCCTGCAGTCATCGTCTTTGGGGACTCCATTGTAGATACAGGAAACAACAACTACATCTCCACTCTTGTCAAATGCAATTTCCCACCATATGGTAGAGATTTTGCAGAAGGAAATCATCCATCTGGGAGGTTCAGCAATGGCTTAGTCCCATCAGATATTATTGCTGCAAAATTTGGAGTGAAGAAGTTCTTACCTCCTTATCTTGATCCAAGTTTGCAACTTCAAGATCTCCTCACTGGTGTAAGCTTTGCCTCAGGTGGGGCAGGATATGATCCTCTAACAGCTGAACTAGTGTCTGTGATGTCATTGTCAGATCAATTAGTGATGTTCAAGGAGTATATAAAGAAGATAAATGATGCAGTTGGAGGAAACAGAACCACACATATAGTGTCTAAGAGCGTATACATTATTTGCATAGGAAGTGATGACATTGCCAATACTTACACTCAATCACCATTCAGACGTGCTGAGTATGATATTCCTTCATACACTGATCTAATGGCCTCTGAAGCCTCAAAGTTCTTGGAGACACTTTATGGAATGGGAGCTAGAAGGATCGGAGTATTTGGTGTACCAGCTATAGGGTGTGTGCCCTCACAAAGAACAATGGGTGGAGGGTTAGATAGAGCATGTGTGGCATCTTCTAACGAAGCAGCAATGCTCTTCAATTCGAAGCTTTCTTCCCAAATGGATGCACTTGGAAAGAAGTTACCTGACACTAGACTTGTTTACCTTGATTCTTACCATGGATTGCTAAAAATGATTACAAATCCTGCTAAATATGGTTTCGAAGTGATAGTGAAAGGATGCTGCGGCACAGGGAATATAGAAGTGAGCATTTTGTGCAACCGCTACGTCATAAACACGTGCTCTAACTCTTCTGACTACATATTTTGGGACAGTTACCATCCAACAGAGAGGGCTTACTATGTTCTTAGTACTTTAACTCTTGATGAAAAAATTAACCAGTTCTTTTAA 1179 0.4012 MASYGRHTIKFFYKLLKPKLRMFKNNIGNNRYRSMSLLCGKLLSQWLLVILMFQHVSALTIPNNETVPAVIVFGDSIVDTGNNNYISTLVKCNFPPYGRDFAEGNHPSGRFSNGLVPSDIIAAKFGVKKFLPPYLDPSLQLQDLLTGVSFASGGAGYDPLTAELVSVMSLSDQLVMFKEYIKKINDAVGGNRTTHIVSKSVYIICIGSDDIANTYTQSPFRRAEYDIPSYTDLMASEASKFLETLYGMGARRIGVFGVPAIGCVPSQRTMGGGLDRACVASSNEAAMLFNSKLSSQMDALGKKLPDTRLVYLDSYHGLLKMITNPAKYGFEVIVKGCCGTGNIEVSILCNRYVINTCSNSSDYIFWDSYHPTERAYYVLSTLTLDEKINQFF 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03539 392 SUPERFAMILY SGNH hydrolase 69 384 - -
Viun3g03539 392 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 70 81 IPR008265 GO:0006629|GO:0016298
Viun3g03539 392 FunFam GDSL esterase/lipase APG 59 388 - -
Viun3g03539 392 PANTHER GDSL ESTERASE/LIPASE EXL3 51 380 - -
Viun3g03539 392 CDD SGNH_plant_lipase_like 68 385 IPR035669 -
Viun3g03539 392 Pfam GDSL-like Lipase/Acylhydrolase 70 379 IPR001087 GO:0016788
Viun3g03539 392 Gene3D SGNH hydrolase 56 387 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03539 Viun-Chr3 42227337 42228932 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03539 42 380 Pollen Coat Proteome AT1G75910 38.304 9.07e-72 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03539 - - vun:114175459 793.497