Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03538 ATGATGATGAATCTTTTCACCCTTAAATCTCTCAATGTATGTCTTTTTGTTGTGCTGTTTTACATATCTGGTGTAACAGCCAAATCACAAACAAATTACAGCAAGTTTGCATTTCCTGCTGTCATAGCTTTTGGTGATTCAATCTTGGATACAGGGAACAACGATTATATTGAAACCATAATGAAGGCAGATTTCAGACCATATGGGAGGGATTTCTTAGGAGGAAAACCCACTGGAAGGTTTAGCAATGGCAGGATCCCGTCAGACTTTTTAGCTGAAAAGTTTGGAATAAAGGAGACTCTGCCACCCTATCTTGATCCAACTCTGGTGATTGAAGACCTCTTAACCGGGGTGTCTTTTGCCTCTGCCGGATCTGGATATGATCCTCTAACAACAGAACTAGCAGCAGTGTTGTCAGTAGAGGATCAACTGAATATGTTCAAAGAGTACATAGAAAAACTGAAGGCAGATGCAGGGAAAGAAAGGACAGCTTTCATTCTAGCAGAAAGCATATTTTTTATCAGTATGGGAAGCAATGACGTTTCAGTAACATATTTCATGTCACCATATCGGAGAAATGAGTGTAGTGTTGAAGAGTACACAAGTATGCTAGTCAAAATATCTTCGGATTTTGTTCAGGAACTGTATAAATATGGAGCAAGAAAGATTGGAGTACTGAGCCTAGCTCCATTAGGATGTGTGCCACTGCAGAGAACATTAGGGGGAGGTGGAGAAAGGAACTGCGTAGAATCAATAAACCAAGCAGCCATGGTCTTCAACTCCAAGCTTTCTTCTTCAATAGAGGCTCTCAACAAAAGTCTTCCAAAAGCTAGGCTTGTCTACCTTGACAACTATAGTGAACTCAATGAAATTATCCAACACTACAACAAATTTGGATTTGAAGCGGGGGATACTGCATGCTGTGGCGTTGCAAATATTGAAGCAGGCATTCTCTGTAATTCCTTCTCCTTAAAAATATGTCAAAATGCTACAAAATATGTATTCTGGGACAGTATTCACCCCACAGAACGAACTTACAATATGCTTGTCACAAGTATCATAGGAAAAAATGTTGACAAGTTTGCTTGA 1089 0.3967 MMMNLFTLKSLNVCLFVVLFYISGVTAKSQTNYSKFAFPAVIAFGDSILDTGNNDYIETIMKADFRPYGRDFLGGKPTGRFSNGRIPSDFLAEKFGIKETLPPYLDPTLVIEDLLTGVSFASAGSGYDPLTTELAAVLSVEDQLNMFKEYIEKLKADAGKERTAFILAESIFFISMGSNDVSVTYFMSPYRRNECSVEEYTSMLVKISSDFVQELYKYGARKIGVLSLAPLGCVPLQRTLGGGGERNCVESINQAAMVFNSKLSSSIEALNKSLPKARLVYLDNYSELNEIIQHYNKFGFEAGDTACCGVANIEAGILCNSFSLKICQNATKYVFWDSIHPTERTYNMLVTSIIGKNVDKFA 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03538 362 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 41 52 IPR008265 GO:0006629|GO:0016298
Viun3g03538 362 PANTHER GDSL ESTERASE/LIPASE EXL3 20 353 - -
Viun3g03538 362 CDD SGNH_plant_lipase_like 39 357 IPR035669 -
Viun3g03538 362 FunFam GDSL esterase/lipase APG 30 358 - -
Viun3g03538 362 SUPERFAMILY SGNH hydrolase 41 353 - -
Viun3g03538 362 Pfam GDSL-like Lipase/Acylhydrolase 41 349 IPR001087 GO:0016788
Viun3g03538 362 Gene3D SGNH hydrolase 27 356 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03538 Viun-Chr3 42220237 42222026 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03538 37 354 Pollen Coat Proteome AT1G75910 40.187 4.96e-82 252