Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03509 ATGGGTGTGTCGCAAAAATGGTTCAGAATTCTTCGTGGAAGATTCATCAGATCATCCAACAAAGACATCATTCTCCCCGGCACAAGTGTTTGCGCCAACGAATGCGAAGAACCCATTCTTAGGAACGAAGACTTCAGTTTCCCTACACCATCACCAACACCAACACCAAAACCAAAACCTATTTCTGCGATCACCAAGGAAGATGTTGCGGCCATTAAGATCCAAGCTTTCTTCAGGGGACATCTTGCGAGACGAGCATATAAGGCATTAAAAGGGCTAGTGAAGGTGCAAGCTTTGGTTCGTGGGGTGTGGGTGAGGAAACAATCACGTATAGCAATGCAGTGTATGCACGCACTTGTAAGATTACAAGTCAGGGTTCGTTCAAGGCAACTACTTGGTAGCTTTCATAAGAAACAAACCATTAGCTGA 429 0.4499 MGVSQKWFRILRGRFIRSSNKDIILPGTSVCANECEEPILRNEDFSFPTPSPTPTPKPKPISAITKEDVAAIKIQAFFRGHLARRAYKALKGLVKVQALVRGVWVRKQSRIAMQCMHALVRLQVRVRSRQLLGSFHKKQTIS 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03509 142 ProSiteProfiles IQ motif profile. 67 95 IPR000048 GO:0005515
Viun3g03509 142 Pfam IQ calmodulin-binding motif 94 108 IPR000048 GO:0005515
Viun3g03509 142 Pfam IQ calmodulin-binding motif 70 88 IPR000048 GO:0005515
Viun3g03509 142 SMART iq_5 66 88 IPR000048 GO:0005515
Viun3g03509 142 Gene3D - 65 118 - -
Viun3g03509 142 PANTHER IQ-DOMAIN 5-RELATED 63 131 - -
Viun3g03509 142 ProSiteProfiles IQ motif profile. 91 118 IPR000048 GO:0005515
Viun3g03509 142 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 68 111 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03509 Viun-Chr3 41954847 41955517 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03509 65 133 IQD Protein Family AT3G51380 75.362 1.74e-33 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03509 - - vun:114179724 248.825