Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03483 ATGGGTCTCTGCTTCTCTGTTGCTCCATGGCTTCATTACTCCTCTCTCAACCGCCGTCACTCTCGAGGTTCATCAGACATTCACGGCAGCAACGTCGAGTCCTGCGGAACTATCACAACCACCAGGATAAGAAAGAGTCAGTTTTCCGTGAGAGAAAGCATTGAAAGCGAATGCTCTCCTCTTCCTTTTCCCGGTGGCCAAATTCTGAAATTGCCTGAGTTGAAGGTGTTCAGTTTTGAGGAGCTGAAATCTGCCACAGGGAATTTCAGGTCCGACAGATTTCTCGGTGAAGGTGGGTTTGGCAGCGTTTACAAGGGATGGTTGGATGAGAACAACCTCACCCCCGCCAAACCAGGCTCTGGAGTGGTAGTTGCCATCAAAATATTCGACCCGGAAGGTTGTCAAGGGTTTTCACAGTGGCAGTCTGAGGTAAACGTTTTAGGAAGGCTTTCTCACCCCAACGTGGTGAGGTTATTGGGGTACTGTTGGGATGAGGATCAGTTTCTTCTTGTGTATGAATTCATGCCAAAGGGAAGCTTAGAGAATCATCTATTCAGAAGAAATCATAGCATGGAACCACTTTCTTGGAACACCCGGCTTAAAATAGTAATCGGTGCAGCTCGGGGATTAGCTTTCTTGCACGCCAACGAAAATTTAGTCATATTCAGAGATTTCAAGACCTCAAATGTACTTCTCGACGGGAATTACAATGCAAAATTATCAGATTTTGGGTTGGCTAAGGTGGGACTATCTGGGGGACAACCACAGGCAACTGCCAGGATCATGGGCACACATGGTTATGCCGCTCCAGAATATGTCGCAACAGGCATGAGGGTAATTGACAAAAGAAGGCCAACAAAGCAGCAGAACCTGGTTGAATGGAGAAAACCATGTCTCTCTTCCAAAAAGAAGTTGAAAAGCATTATGGATGGTAGGATAGAGGGTCAATATTCAACCAAGGCTGCATTAGAAACAGCAAAACTTACTCTGAAATGCCTAAAGCCTGACCCTAGACAACGTCCTTCAATGAAACAAGTACTTGAGCGATTGGAAGCCATTGAAGATATCCATTGA 1074 0.459 MGLCFSVAPWLHYSSLNRRHSRGSSDIHGSNVESCGTITTTRIRKSQFSVRESIESECSPLPFPGGQILKLPELKVFSFEELKSATGNFRSDRFLGEGGFGSVYKGWLDENNLTPAKPGSGVVVAIKIFDPEGCQGFSQWQSEVNVLGRLSHPNVVRLLGYCWDEDQFLLVYEFMPKGSLENHLFRRNHSMEPLSWNTRLKIVIGAARGLAFLHANENLVIFRDFKTSNVLLDGNYNAKLSDFGLAKVGLSGGQPQATARIMGTHGYAAPEYVATGMRVIDKRRPTKQQNLVEWRKPCLSSKKKLKSIMDGRIEGQYSTKAALETAKLTLKCLKPDPRQRPSMKQVLERLEAIEDIH 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03483 357 ProSiteProfiles Protein kinase domain profile. 89 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g03483 357 Gene3D Phosphorylase Kinase; domain 1 73 174 - -
Viun3g03483 357 SUPERFAMILY Protein kinase-like (PK-like) 67 350 IPR011009 -
Viun3g03483 357 Gene3D Transferase(Phosphotransferase) domain 1 177 274 - -
Viun3g03483 357 Gene3D Transferase(Phosphotransferase) domain 1 275 356 - -
Viun3g03483 357 Pfam Protein kinase domain 90 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g03483 357 PANTHER OS01G0588500 PROTEIN-RELATED 46 353 - -
Viun3g03483 357 FunFam Serine/threonine-protein kinase BIK1 63 174 - -
Viun3g03483 357 FunFam Os07g0541700 protein 175 264 - -
Viun3g03483 357 ProSitePatterns Protein kinases ATP-binding region signature. 95 127 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03483 Viun-Chr3 41738245 41740791 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03483 75 350 Glycoside Hydrolase AT3G07070 42.617 3.37e-77 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Viun3g03483 Pkinase 5.4e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03483 - - vum:124825635 508.064