Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03454 ATGGGAGGCTTATTGCACATGTTTGAGTTCAATCAGGGTAGGATGGCAAAGAAAATTCATGCCCATAAGAACAATAACGATGATATGGAAACATCTGGAAATGGCATGAAGCTGCAAGTAGAAACCTCTCATGTCCACTGTGCAGAAGGAGAATTACCATACTCGTGTCAGGTAGAAGATGGCTGGTCAAAGAAAATTGGTTACTCAAATGTGGATCCAGTGAAAAAAGCGAACAAAGAGGGTTTTTCCAAACAATCAGGCACCAGAAGTAATGCCCCCAGCGTTGTGGCAAGGTTGATGGGGATAGAAACCATGCCATTACCGTTAGACACTAAATCTGTAGTTCCATTGGATGAAAGCACACATGAAAATATGGAGAGGAAGTTTTCAAAGAAGAAAATGAATGGGAAAGGTTGGGCTGGTAGGGGTTCTTCAAACTTGAATTCTTTTAGCCATATGGAATTTGATTCATTTTATCAGCACACTGATGATGATGATGATGAAGGTGGACATAGTTTTGGAGAACCGAGGCCGAGGGAACATCCTCAAGAGGAGGAACTCCAAAAATTCAAGAAAGAATTTGAAGAGTATCAATCAACAAGGTTTAAGGAGTGGCCAAAGCTACCCAATGGCCACCAGATGGAGTCAATCTTATCTAAGAAAAAAGAATCCTTTCCATCAAGAAGTAAAACACAAAGTAGGGACTTTGAGGAGTCTTTAATGATGAAATCCAAAAGCAGATTATTAGATATATGCACTTCTCCCACTCAGATAGTTATCTTGAAGCCTGGTTCTGAAAGGGTTTGCAATTGCAACCATGAAGAGAATTGCACCAGTTTATCAGGCACTTTACATAAGAGAAAAGGTATAGAAGATTTTCTTGAGGAAGTGAGAGAGCGCTTGAGGTGTGAACTCCAAGGGATTAGAGATGGTGGAATTGAGACACCTTTCAATGATAAATCTGATGCTAAAGAGGTCACAGAAAGTATGACTAGAGATGCTGAACCTAATTTACTCCGCTCAGAGTCAACAAGATCATACAAAAGTAAAATGCAGCTCAATGGACAAAGTTCCCCAGAATTTTTCAACATAGATACTAGGAGGTTCTTGTCAGAGAGGCTAAGAAATACGGTAAAAAATGAATTGCATTTGGACATTCCTGAAGTGGCTTGTTATTTAGACAATGACAGAGTTAGACTAAAACAAGATACTATAAAGGGTGCAAATGACAAGAGCCAGTGGGGAGTTCTAGAAGAGAAAAAAGAATTACAAACATGTTCCAATAGACATAAATTAGATGACAATGTATTGCTCCACAAGGAGTTGTCACCTAGGAACCTTGAAAGATCCTTGTCTGCTCCTGCATCAGGAGCATCATTTGGAAGGCTTCTTTTGGAGGATCGCCACATTTTAACGGGTGCCCTTATTCAGAGGAAGCTTGAAGCTGTTGAAGCAAGGCCTGTGGGTGTTAAAAAGCAGAAGAAAGATGGATTTAATATTAAAGAAAAACTTTCCAACTTTAAATATACTTTTGGTCTAAGAGGGAAGCTCTTTGGCAAAAGAGTTAAGTCAAAAGTAGAATCACATGGCAGCGAACATGGTGCAATTTTGAGAGATGTCAGGAGTGGACCAACTATTCTCATGAAATATGGTGACAGACATGAGAACTCCACCGAGGTACCTCCTAGTCCTGCATCTGTAAGCAGCTGTGCTGATGAAGAACATTGGAGACAGAGCGGGTATTCAAGTCTAACATCAACTCCAGATGCATCTTCATTAGATGATATTTTTGTTCCCAAGGTTTTCAGAGATATCAGCTCTGGTTTGAACGACCTAAAGAGGCAACTGAGCGAGCTTGATTCTGACGGCTATGTTGATTTCACCACAAAGCAGGAGCCGATTGAGTTTTCATTAGTTGAACTGGATGATCCAGCAGAATCTTATGTAAGAGATCTGCTTGTTGCCTCTGGTTTGTACTTTGGTTCATGGGATAAATACATTGGCAACTCAGTTTTTGAAGAAGTGGAAGAATCTCATAGGAAATTGGTGAAGGAGGATGAAAGATCCACAAAAGATCATAACAAGAATAAGTTAGAGCACAAGGTTTTGCTTGATTTGTTAAATGAGGCACTTGCCATTGTTCTTGGACCACCTTTGACATTGTCTAGATTCAGAAGGAAACTAAGCAATTCCTCGTTGCAACCTCCACCATGTGGAAAGGAACTACTAAAGTTAGTATGGGACATTGTCCGTGTTTCTTTACATCCAACGTCCAACACATCTCTTTATTCAGTTGATAGTTTTGTGGCACAAGATCTTGCATCTATTTCCTGGTCTGGGCTAACAAATGATGAGATTGATACATTGGAAAGAGAGACTGCATGTACAATCGCCGATGATTTGGTTGAAGAATTCACAAAGGATATGCTCTTGTAG 2436 0.4007 MGGLLHMFEFNQGRMAKKIHAHKNNNDDMETSGNGMKLQVETSHVHCAEGELPYSCQVEDGWSKKIGYSNVDPVKKANKEGFSKQSGTRSNAPSVVARLMGIETMPLPLDTKSVVPLDESTHENMERKFSKKKMNGKGWAGRGSSNLNSFSHMEFDSFYQHTDDDDDEGGHSFGEPRPREHPQEEELQKFKKEFEEYQSTRFKEWPKLPNGHQMESILSKKKESFPSRSKTQSRDFEESLMMKSKSRLLDICTSPTQIVILKPGSERVCNCNHEENCTSLSGTLHKRKGIEDFLEEVRERLRCELQGIRDGGIETPFNDKSDAKEVTESMTRDAEPNLLRSESTRSYKSKMQLNGQSSPEFFNIDTRRFLSERLRNTVKNELHLDIPEVACYLDNDRVRLKQDTIKGANDKSQWGVLEEKKELQTCSNRHKLDDNVLLHKELSPRNLERSLSAPASGASFGRLLLEDRHILTGALIQRKLEAVEARPVGVKKQKKDGFNIKEKLSNFKYTFGLRGKLFGKRVKSKVESHGSEHGAILRDVRSGPTILMKYGDRHENSTEVPPSPASVSSCADEEHWRQSGYSSLTSTPDASSLDDIFVPKVFRDISSGLNDLKRQLSELDSDGYVDFTTKQEPIEFSLVELDDPAESYVRDLLVASGLYFGSWDKYIGNSVFEEVEESHRKLVKEDERSTKDHNKNKLEHKVLLDLLNEALAIVLGPPLTLSRFRRKLSNSSLQPPPCGKELLKLVWDIVRVSLHPTSNTSLYSVDSFVAQDLASISWSGLTNDEIDTLERETACTIADDLVEEFTKDMLL 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03454 811 MobiDBLite consensus disorder prediction 119 141 - -
Viun3g03454 811 MobiDBLite consensus disorder prediction 159 186 - -
Viun3g03454 811 MobiDBLite consensus disorder prediction 315 331 - -
Viun3g03454 811 MobiDBLite consensus disorder prediction 119 133 - -
Viun3g03454 811 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 210 810 - -
Viun3g03454 811 MobiDBLite consensus disorder prediction 314 334 - -
Viun3g03454 811 MobiDBLite consensus disorder prediction 164 186 - -
Viun3g03454 811 Pfam Domain of unknown function (DUF4378) 647 804 IPR025486 -
Viun3g03454 811 Pfam DUF761-associated sequence motif 87 106 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03454 Viun-Chr3 41556764 41561665 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03454 74 809 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 36.889 9.45e-127 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03454 - - gmx:100810825 1244.95