Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03452 ATGGGAGGCTTATTGCACATGTTTGAGTTCAATCAGGGTAGGATGGCAAAGAAAATTCATGCCCATAAGAACAATAACGATGATATGGAAACATCTGGAAATGGCATGAAGCTGCAAGTAGAAACCTCTCATGTCCACTGTGCAGAAGGAGAATTACCATACTCGTGTCAGGTAGAAGATGGCTGGTCAAAGAAAATTGGTTACTCAAATGTGGATCCAGTGAAAAAAGCGAACAAAGAGGGTTTTTCCAAACAATCAGGCACCAGAAGTAATGCCCCCAGCGTTGTGGCAAGGTTGATGGGGATAGAAACCATGCCATTACCGTTAGACACTAAATCTGTAGTTCCATTGGATGAAAGCACACATGAAAATATGGAGAGGAAGTTTTCAAAGAAGAAAATGAATGGGAAAGGTTGGGCTGGTGGACATAGTTTTGGAGAACCGAGGCCGAGGGAACATCCTCAAGAGGAGGAACTCCAAAAATTCAAGAAAGAATTTGAAGAGTATCAATCAACAAGGTTTAAGGAGTGGCCAAAGCTACCCAATGGCCACCAGATGGAGTCAATCTTATCTAAGAAAAAAGAATCCTTTCCATCAAGAAGTAAAACACAAAGTAGGGACTTTGAGGAGTCTTTAATGATGAAATCCAAAAGCAGATTATTAGATATATGCACTTCTCCCACTCAGATAGTTATCTTGAAGCCTGGTTCTGAAAGGGTTTGCAATTGCAACCATGAAGAGAATTGCACCAGTTTATCAGGCACTTTACATAAGAGAAAAGGTATAGAAGATTTTCTTGAGGAAGTGAGAGAGCGCTTGAGGTGTGAACTCCAAGGGATTAGAGATGGTGGAATTGAGACACCTTTCAATGATAAATCTGATGCTAAAGAGGTCACAGAAAGTATGACTAGAGATGCTGAACCTAATTTACTCCGCTCAGAGTCAACAAGATCATACAAAAGTAAAATGCAGCTCAATGGACAAAGTTCCCCAGAATTTTTCAACATAGATACTAGGAGGTTCTTGTCAGAGAGGCTAAGAAATACGGTAAAAAATGAATTGCATTTGGACATTCCTGAAGTGGCTTGTTATTTAGACAATGACAGAGTTAGACTAAAACAAGATACTATAAAGGGTGCAAATGACAAGAGCCAGTGGGGAGTTCTAGAAGAGAAAAAAGAATTACAAACATGTTCCAATAGACATAAATTAGATGACAATGTATTGCTCCACAAGGAGTTGTCACCTAGGAACCTTGAAAGATCCTTGTCTGCTCCTGCATCAGGAGCATCATTTGGAAGGCTTCTTTTGGAGGATCGCCACATTTTAACGGGTGCCCTTATTCAGAGGAAGCTTGAAGCTGTTGAAGCAAGGCCTGTGGGTGTTAAAAAGCAGAAGAAAGATGGATTTAATATTAAAGAAAAACTTTCCAACTTTAAATATACTTTTGGTCTAAGAGGGAAGCTCTTTGGCAAAAGAGTTAAGTCAAAAGTAGAATCACATGGCAGCGAACATGGTGCAATTTTGAGAGATGTCAGGAGTGGACCAACTATTCTCATGAAATATGGTGACAGACATGAGAACTCCACCGAGGTACCTCCTAGTCCTGCATCTGTAAGCAGCTGTGCTGATGAAGAACATTGGAGACAGAGCGGGTATTCAAGTCTAACATCAACTCCAGATGCATCTTCATTAGATGATATTTTTGTTCCCAAGGTTTTCAGAGATATCAGCTCTGGTTTGAACGACCTAAAGAGGCAACTGAGCGAGCTTGATTCTGACGGCTATGTTGATTTCACCACAAAGCAGGAGCCGATTGAGTTTTCATTAGTTGAACTGGATGATCCAGCAGAATCTTATGTAAGAGATCTGCTTGTTGCCTCTGGTTTGTACTTTGGTTCATGGGATAAATACATTGGCAACTCAGTTTTTGAAGAAGTGGAAGAATCTCATAGGAAATTGGTGAAGGAGGATGAAAGATCCACAAAAGATCATAACAAGAATAAGTTAGAGCACAAGGTTTTGCTTGATTTGTTAAATGAGGCACTTGCCATTGTTCTTGGACCACCTTTGACATTGTCTAGATTCAGAAGGAAACTAAGCAATTCCTCGTTGCAACCTCCACCATGTGGAAAGGAACTACTAAAGTTAGTATGGGACATTGTCCGTGTTTCTTTACATCCAACGTCCAACACATCTCTTTATTCAGTTGATAGTTTTGTGGCACAAGATCTTGCATCTATTTCCTGGTCTGGGCTAACAAATGATGAGATTGATACATTGGAAAGAGAGACTGCATGTACAATCGCCGATGATTTGGTTGAAGAATTCACAAAGGATATGCTCTTGTAG 2352 0.4026 MGGLLHMFEFNQGRMAKKIHAHKNNNDDMETSGNGMKLQVETSHVHCAEGELPYSCQVEDGWSKKIGYSNVDPVKKANKEGFSKQSGTRSNAPSVVARLMGIETMPLPLDTKSVVPLDESTHENMERKFSKKKMNGKGWAGGHSFGEPRPREHPQEEELQKFKKEFEEYQSTRFKEWPKLPNGHQMESILSKKKESFPSRSKTQSRDFEESLMMKSKSRLLDICTSPTQIVILKPGSERVCNCNHEENCTSLSGTLHKRKGIEDFLEEVRERLRCELQGIRDGGIETPFNDKSDAKEVTESMTRDAEPNLLRSESTRSYKSKMQLNGQSSPEFFNIDTRRFLSERLRNTVKNELHLDIPEVACYLDNDRVRLKQDTIKGANDKSQWGVLEEKKELQTCSNRHKLDDNVLLHKELSPRNLERSLSAPASGASFGRLLLEDRHILTGALIQRKLEAVEARPVGVKKQKKDGFNIKEKLSNFKYTFGLRGKLFGKRVKSKVESHGSEHGAILRDVRSGPTILMKYGDRHENSTEVPPSPASVSSCADEEHWRQSGYSSLTSTPDASSLDDIFVPKVFRDISSGLNDLKRQLSELDSDGYVDFTTKQEPIEFSLVELDDPAESYVRDLLVASGLYFGSWDKYIGNSVFEEVEESHRKLVKEDERSTKDHNKNKLEHKVLLDLLNEALAIVLGPPLTLSRFRRKLSNSSLQPPPCGKELLKLVWDIVRVSLHPTSNTSLYSVDSFVAQDLASISWSGLTNDEIDTLERETACTIADDLVEEFTKDMLL 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03452 783 MobiDBLite consensus disorder prediction 287 303 - -
Viun3g03452 783 Pfam DUF761-associated sequence motif 87 106 IPR032795 -
Viun3g03452 783 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 182 782 - -
Viun3g03452 783 MobiDBLite consensus disorder prediction 286 306 - -
Viun3g03452 783 Pfam Domain of unknown function (DUF4378) 619 776 IPR025486 -
Viun3g03452 783 MobiDBLite consensus disorder prediction 126 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03452 Viun-Chr3 41556764 41561665 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03452 74 781 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 37.351 8.42e-127 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03452 - - gmx:100810825 1194.87