Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03451 ATGGGAGGCTTATTGCACATGTTTGAGTTCAATCAGGGTAGGATGGCAAAGAAAATTCATGCCCATAAGAACAATAACGATGATATGGAAACATCTGGAAATGGCATGAAGCTGCAAGTAGAAACCTCTCATGTCCACTGTGCAGAAGGAGAATTACCAGTAGAAGATGGCTGGTCAAAGAAAATTGGTTACTCAAATGTGGATCCAGTGAAAAAAGCGAACAAAGAGGGTTTTTCCAAACAATCAGGCACCAGAAGTAATGCCCCCAGCGTTGTGGCAAGGTTGATGGGGATAGAAACCATGCCATTACCGTTAGACACTAAATCTGTAGTTCCATTGGATGAAAGCACACATGAAAATATGGAGAGGAAGTTTTCAAAGAAGAAAATGAATGGGAAAGGTTGGGCTGGTAGGGGTTCTTCAAACTTGAATTCTTTTAGCCATATGGAATTTGATTCATTTTATCAGCACACTGATGATGATGATGATGAAGGTGGACATAGTTTTGGAGAACCGAGGCCGAGGGAACATCCTCAAGAGGAGGAACTCCAAAAATTCAAGAAAGAATTTGAAGAGTATCAATCAACAAGGTTTAAGGAGTGGCCAAAGCTACCCAATGGCCACCAGATGGAGTCAATCTTATCTAAGAAAAAAGAATCCTTTCCATCAAGAAGTAAAACACAAAGTAGGGACTTTGAGGAGTCTTTAATGATGAAATCCAAAAGCAGATTATTAGATATATGCACTTCTCCCACTCAGATAGTTATCTTGAAGCCTGGTTCTGAAAGGGTTTGCAATTGCAACCATGAAGAGAATTGCACCAGTTTATCAGGCACTTTACATAAGAGAAAAGGTATAGAAGATTTTCTTGAGGAAGTGAGAGAGCGCTTGAGGTGTGAACTCCAAGGGATTAGAGATGGTGGAATTGAGACACCTTTCAATGATAAATCTGATGCTAAAGAGGTCACAGAAAGTATGACTAGAGATGCTGAACCTAATTTACTCCGCTCAGAGTCAACAAGATCATACAAAAGTAAAATGCAGCTCAATGGACAAAGTTCCCCAGAATTTTTCAACATAGATACTAGGAGGTTCTTGTCAGAGAGGCTAAGAAATACGGTAAAAAATGAATTGCATTTGGACATTCCTGAAGTGGCTTGTTATTTAGACAATGACAGAGTTAGACTAAAACAAGATACTATAAAGGGTGCAAATGACAAGAGCCAGTGGGGAGTTCTAGAAGAGAAAAAAGAATTACAAACATGTTCCAATAGACATAAATTAGATGACAATGTATTGCTCCACAAGGAGTTGTCACCTAGGAACCTTGAAAGATCCTTGTCTGCTCCTGCATCAGGAGCATCATTTGGAAGGCTTCTTTTGGAGGATCGCCACATTTTAACGGGTGCCCTTATTCAGAGGAAGCTTGAAGCTGTTGAAGCAAGGCCTGTGGGTGTTAAAAAGCAGAAGAAAGATGGATTTAATATTAAAGAAAAACTTTCCAACTTTAAATATACTTTTGGTCTAAGAGGGAAGCTCTTTGGCAAAAGAGTTAAGTCAAAAGTAGAATCACATGGCAGCGAACATGGTGCAATTTTGAGAGATGTCAGGAGTGGACCAACTATTCTCATGAAATATGGTGACAGACATGAGAACTCCACCGAGGTACCTCCTAGTCCTGCATCTGTAAGCAGCTGTGCTGATGAAGAACATTGGAGACAGAGCGGGTATTCAAGTCTAACATCAACTCCAGATGCATCTTCATTAGATGATATTTTTGTTCCCAAGGTTTTCAGAGATATCAGCTCTGGTTTGAACGACCTAAAGAGGCAACTGAGCGAGCTTGATTCTGACGGCTATGTTGATTTCACCACAAAGCAGGAGCCGATTGAGTTTTCATTAGTTGAACTGGATGATCCAGCAGAATCTTATGTAAGAGATCTGCTTGTTGCCTCTGGTTTGTACTTTGGTTCATGGGATAAATACATTGGCAACTCAGTTTTTGAAGAAGTGGAAGAATCTCATAGGAAATTGGTGAAGGAGGATGAAAGATCCACAAAAGATCATAACAAGAATAAGTTAGAGCACAAGGTTTTGCTTGATTTGTTAAATGAGGCACTTGCCATTGTTCTTGGACCACCTTTGACATTGTCTAGATTCAGAAGGAAACTAAGCAATTCCTCGTTGCAACCTCCACCATGTGGAAAGGAACTACTAAAGTTAGTATGGGACATTGTCCGTGTTTCTTTACATCCAACGTCCAACACATCTCTTTATTCAGTTGATAGTTTTGTGGCACAAGATCTTGCATCTATTTCCTGGTCTGGGCTAACAAATGATGAGATTGATACATTGGAAAGAGAGACTGCATGTACAATCGCCGATGATTTGGTTGAAGAATTCACAAAGGATATGCTCTTGTAG 2424 0.4002 MGGLLHMFEFNQGRMAKKIHAHKNNNDDMETSGNGMKLQVETSHVHCAEGELPVEDGWSKKIGYSNVDPVKKANKEGFSKQSGTRSNAPSVVARLMGIETMPLPLDTKSVVPLDESTHENMERKFSKKKMNGKGWAGRGSSNLNSFSHMEFDSFYQHTDDDDDEGGHSFGEPRPREHPQEEELQKFKKEFEEYQSTRFKEWPKLPNGHQMESILSKKKESFPSRSKTQSRDFEESLMMKSKSRLLDICTSPTQIVILKPGSERVCNCNHEENCTSLSGTLHKRKGIEDFLEEVRERLRCELQGIRDGGIETPFNDKSDAKEVTESMTRDAEPNLLRSESTRSYKSKMQLNGQSSPEFFNIDTRRFLSERLRNTVKNELHLDIPEVACYLDNDRVRLKQDTIKGANDKSQWGVLEEKKELQTCSNRHKLDDNVLLHKELSPRNLERSLSAPASGASFGRLLLEDRHILTGALIQRKLEAVEARPVGVKKQKKDGFNIKEKLSNFKYTFGLRGKLFGKRVKSKVESHGSEHGAILRDVRSGPTILMKYGDRHENSTEVPPSPASVSSCADEEHWRQSGYSSLTSTPDASSLDDIFVPKVFRDISSGLNDLKRQLSELDSDGYVDFTTKQEPIEFSLVELDDPAESYVRDLLVASGLYFGSWDKYIGNSVFEEVEESHRKLVKEDERSTKDHNKNKLEHKVLLDLLNEALAIVLGPPLTLSRFRRKLSNSSLQPPPCGKELLKLVWDIVRVSLHPTSNTSLYSVDSFVAQDLASISWSGLTNDEIDTLERETACTIADDLVEEFTKDMLL 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03451 807 MobiDBLite consensus disorder prediction 155 182 - -
Viun3g03451 807 MobiDBLite consensus disorder prediction 115 137 - -
Viun3g03451 807 MobiDBLite consensus disorder prediction 311 327 - -
Viun3g03451 807 MobiDBLite consensus disorder prediction 115 129 - -
Viun3g03451 807 MobiDBLite consensus disorder prediction 160 182 - -
Viun3g03451 807 MobiDBLite consensus disorder prediction 310 330 - -
Viun3g03451 807 Pfam DUF761-associated sequence motif 83 102 IPR032795 -
Viun3g03451 807 Pfam Domain of unknown function (DUF4378) 643 800 IPR025486 -
Viun3g03451 807 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 206 806 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03451 Viun-Chr3 41556764 41561665 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03451 70 805 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 36.889 1.37e-126 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03451 - - gmx:100810825 1229.54