Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03432 ATGACTGGTCATTGTACATGCACGACAGACACTTTGAGAATCTCAGAATCTATTACAGAATATGTAGCTCGTACTCCTACCCTGTCAGATGATGGAGCAGTTACCCTTGGATCTAAAAGAAGCACTTTGTTTGAAGTTGATGCTATAACTGGATCAATCATTCAAGTCTATGCGATGCCTGATCCTGTTAATGCTTCTGCACCTTGGAGTGATGGGAGGCAAAGTGTTACAAATATCCCCAACATAAATAATAGAGATCTTGCTGATCCTGTGAAACTAAATTCACCACAGCTGCTGCTTAAGATTTTTAGGACAGATTATTCCCTTCAATCTGTTAGTCCGAGCTCGGGAATAGTTTTGTGGACTATGGCATTAGCTGAATTTCAGGCTGTATTGTTATGCCAACATTCCTCTTCTGATATAGAGGATGAGTATGTTTCCGATAGTGGCCTCAATTTTACAATGCCATACCCATGTCAAGAGATACGACAAGTCTTCCGCCTGAAAAAGAACCTATTTGAACCTTCACTAATGCTTCCTTTGCAGCCAAATATTGATAGATTATTCACTGGTGATGATGATAATATCATGCTCCCTCAACCTCTCATCCAGATTACTACACCAAGGGAAATTTATTTGAACAGGACAATTGAGTGGCCAACTCTGTTACCTCTTGTATTGTTTACCATCTTTCTTTTGGCAATTTCACTCATCTATCCTCTAGTGATTAAGGATCAAGAAACACCGAAGGACCAAAATAGTGAGTCTGAATTAAAATGTTCACCTGCTAAGAAAAAGAAAACACATAAATCAGGAAGGAAAAATGGCATTATCAATAAAAGGGAAAGTCATATGTATTCAGAGAATGAGAAGGTTTGGACAGAAAAAGATAATGATAGAGAAGTATGGAAGCACTTCAATCATGTCAATGAAAATGTTGATGGACGAAGAGTTGGTAAATTATTTGTTTCGAACAAAGAGATTTCTAAGGGAAGCAATGGCACCATTGTGCTCGAGGGTATATACGAAGGTCGAGCAGTTGCTATCAAACGTCTTGTCAAGGCTCACCATGACATAGCTTTTAAGGAAATAAAAAACCTTATCATGTCTGATCGTCATCCGAATATTGTTCGATGGCATGGGGTGGAGTATGATAACGATTTTGTTTACCTTGCTTTGGAACGATGTACCTGCAATTTAGATGATTTGGTTCAAATTTATTCAGATATATCAGTAAACTCTGCGTTTAGGAAAGACCAAGATATTGGATGTTTGATTAAGTCCCAAATAGAGATGGGGAAGGACAGTACACAGTGTCTTTGGAAGGAAAATGGCTATCCATCTCCTCTATTACTAAAACTGATGAGGGACATTGTTTCCGGGGTCATTCATTTGCATGAATTAGGAATAATACATCGAGATATGAAACCACAAAATGTTCTAATAACCAAGGAGAGATACTTATGTGCTAAACTTTCTGATATGGGAATTAGCAAATGTCTTGTTGAAAATATGTCTTCTCTGGGTAATAATGCAACTGGTGGTGGCAGCTCAGGTTGGCAAGCACCAGAACAACTTGTTCAAGGACGTCAAACACGAGCAGTAGATATATTTAGTTTAGGCTGCGTCTTCTTTTTCTGCATTACTGGGGGAAGACATCCGTTTGGAGAACGTATTGAACGGGATGTCAATATTTTGAAAAATCGCATGGACCTTTTCTTAGTGGAGTTCATTCCTGAAGCCAAAGATCTTATTAGCCGTTTACTAAACCCTTACCCTGATCTAAGGCCAAAGGCGAGTGAAGTTTTGTACCATCCTTTTTTCTGGAGTTCCGAGATGCGACTTTCGTTTTTGCGTGACACCAGTGACAGGGTGGAAGTGGAAAACAGAGAGACTAATTCTGATCTTTTGGTGACATTAGAAAGCATTGCCACAGATGCCTTGGGTGGAAAATGGGATGAAAGGATGGAACCAGCTTTCATTGCTAACATCGGTCATTATCGGCGGTATAATTTTAACAGTGTCCGAGACTTGTTGCGAGTTATGAGAAACAAACTAAATCATTACAGAGAATTGCCTCGAGAAATCCAGGAACTTGTAGGAGCTGTTCCCGAAGGGTTCTACGAATACTTTGCAAATAGATACCCAAGACTCTTGATTGAGGTGTATAAAGTTATCCTTCATTATTGCAAGGAGGAAGAATGTTTTCAAAGATATTTTAGATGTGTTGATTAG 2235 0.3906 MTGHCTCTTDTLRISESITEYVARTPTLSDDGAVTLGSKRSTLFEVDAITGSIIQVYAMPDPVNASAPWSDGRQSVTNIPNINNRDLADPVKLNSPQLLLKIFRTDYSLQSVSPSSGIVLWTMALAEFQAVLLCQHSSSDIEDEYVSDSGLNFTMPYPCQEIRQVFRLKKNLFEPSLMLPLQPNIDRLFTGDDDNIMLPQPLIQITTPREIYLNRTIEWPTLLPLVLFTIFLLAISLIYPLVIKDQETPKDQNSESELKCSPAKKKKTHKSGRKNGIINKRESHMYSENEKVWTEKDNDREVWKHFNHVNENVDGRRVGKLFVSNKEISKGSNGTIVLEGIYEGRAVAIKRLVKAHHDIAFKEIKNLIMSDRHPNIVRWHGVEYDNDFVYLALERCTCNLDDLVQIYSDISVNSAFRKDQDIGCLIKSQIEMGKDSTQCLWKENGYPSPLLLKLMRDIVSGVIHLHELGIIHRDMKPQNVLITKERYLCAKLSDMGISKCLVENMSSLGNNATGGGSSGWQAPEQLVQGRQTRAVDIFSLGCVFFFCITGGRHPFGERIERDVNILKNRMDLFLVEFIPEAKDLISRLLNPYPDLRPKASEVLYHPFFWSSEMRLSFLRDTSDRVEVENRETNSDLLVTLESIATDALGGKWDERMEPAFIANIGHYRRYNFNSVRDLLRVMRNKLNHYRELPREIQELVGAVPEGFYEYFANRYPRLLIEVYKVILHYCKEEECFQRYFRCVD 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03432 744 MobiDBLite consensus disorder prediction 250 277 - -
Viun3g03432 744 SMART PGNneu 673 727 - -
Viun3g03432 744 SMART serkin_6 322 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g03432 744 ProSiteProfiles KEN domain profile. 611 742 IPR010513 GO:0004540|GO:0006397
Viun3g03432 744 Pfam Ribonuclease 2-5A 614 740 IPR010513 GO:0004540|GO:0006397
Viun3g03432 744 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
Viun3g03432 744 FunFam Serine/threonine-protein kinase/endoribonuclease IRE1a 433 610 - -
Viun3g03432 744 ProSiteProfiles Protein kinase domain profile. 322 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g03432 744 CDD RNase_Ire1 612 740 - -
Viun3g03432 744 Gene3D Phosphorylase Kinase; domain 1 306 394 - -
Viun3g03432 744 FunFam Serine/threonine-protein kinase/endoribonuclease IRE1 612 744 - -
Viun3g03432 744 Pfam Protein kinase domain 324 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g03432 744 SUPERFAMILY Protein kinase-like (PK-like) 322 613 IPR011009 -
Viun3g03432 744 Gene3D Transferase(Phosphotransferase) domain 1 434 610 - -
Viun3g03432 744 FunFam Putative Serine/threonine-protein kinase/endoribonuclease IRE1 314 394 - -
Viun3g03432 744 PANTHER IRE1-RELATED 14 742 IPR045133 GO:0004521|GO:0004674|GO:0030968
Viun3g03432 744 Gene3D KEN domain 611 743 IPR038357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03432 Viun-Chr3 41385296 41393289 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03432 344 607 MAP Kinase Kinase Kinase AT3G06030 26.619 1.50e-20 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Viun3g03432 Pkinase 4.2e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03432 K08852 - gmx:100788389 1240.33