Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03431 ATGAAGTTTCTTCCTCTTCGCTTTTCCTTTCTTTTTGCCTTCCTAATCGCGTTCTGCCTCGTCCAAACCTCACCAACAACGCTTCCCAAACATCACAAGAATGAAGAATGCGATGGGCATAATGGACTTCATCGACCCTCACGATCCCTTCTCTCTCTTCCACCTAGGGTTGCAACGACGGCACTGGTTGTGACCCTCGATGGGACTATGTATTTGGTGGACAGATCTCCTGGTTCCATGAAGGTGATATGGTCATTCTCGACAGGATCGCCCATCTACCAATCGTATAGAGCTACCGTGAAAAGGGATACTGATAAAGAAAATGCATCTGCAGCACTAATGAGTGGATTCGTGGAATGTGGGGATGACTGGTCATTGTACATGCACGACAGACACTTTGGTAAAATGAGAATCTCAGAATCTATTACAGAATATGTAGCTCGTACTCCTACCCTGTCAGATGATGGAGCAGTTACCCTTGGATCTAAAAGAAGCACTTTGTTTGAAGTTGATGCTATAACTGGATCAATCATTCAAGTCTATGCGATGCCTGATCCTGTTAATGCTTCTGCACCTTGGAGTGATGGGAGGCAAAGTGTTACAAATATCCCCAACATAAATAATAGAGATCTTGCTGATCCTGTGAAACTAAATTCACCACAGCTGCTGCTTAAGATTTTTAGGACAGATTATTCCCTTCAATCTGTTAGTCCGAGCTCGGGAATAGTTTTGTGGACTATGGCATTAGCTGAATTTCAGGCTGTATTGTTATGCCAACATTCCTCTTCTGATATAGAGGATGAGTATGTTTCCGATAGTGGCCTCAATTTTACAATGCCATACCCATGTCAAGAGATACGACAAGTCTTCCGCCTGAAAAAGAACCTATTTGAACCTTCACTAATGCTTCCTTTGCAGCCAAATATTGATAGATTATTCACTGGTGATGATGATAATATCATGCTCCCTCAACCTCTCATCCAGATTACTACACCAAGGGAAATTTATTTGAACAGGACAATTGAGTGGCCAACTCTGTTACCTCTTGTATTGTTTACCATCTTTCTTTTGGCAATTTCACTCATCTATCCTCTAGTGATTAAGGATCAAGAAACACCGAAGGACCAAAATAGTGAGTCTGAATTAAAATGTTCACCTGCTAAGAAAAAGAAAACACATAAATCAGGAAGGAAAAATGGCATTATCAATAAAAGGGAAAGTCATATGTATTCAGAGAATGAGAAGGTTTGGACAGAAAAAGATAATGATAGAGAAGTATGGAAGCACTTCAATCATGTCAATGAAAATGTTGATGGACGAAGAGTTGGTAAATTATTTGTTTCGAACAAAGAGATTTCTAAGGGAAGCAATGGCACCATTGTGCTCGAGGGTATATACGAAGGTCGAGCAGTTGCTATCAAACGTCTTGTCAAGGCTCACCATGACATAGCTTTTAAGGAAATAAAAAACCTTATCATGTCTGATCGTCATCCGAATATTGTTCGATGGCATGGGGTGGAGTATGATAACGATTTTGTTTACCTTGCTTTGGAACGATGTACCTGCAATTTAGATGATTTGGTTCAAATTTATTCAGATATATCAGTAAACTCTGCGTTTAGGAAAGACCAAGATATTGGATGTTTGATTAAGTCCCAAATAGAGATGGGGAAGGACAGTACACAGTGTCTTTGGAAGGAAAATGGCTATCCATCTCCTCTATTACTAAAACTGATGAGGGACATTGTTTCCGGGGTCATTCATTTGCATGAATTAGGAATAATACATCGAGATATGAAACCACAAAATGTTCTAATAACCAAGGAGAGATACTTATGTGCTAAACTTTCTGATATGGGAATTAGCAAATGTCTTGTTGAAAATATGTCTTCTCTGGGTAATAATGCAACTGGTGGTGGCAGCTCAGGTTGGCAAGCACCAGAACAACTTGTTCAAGGACGTCAAACACGAGCAGTAGATATATTTAGTTTAGGCTGCGTCTTCTTTTTCTGCATTACTGGGGGAAGACATCCGTTTGGAGAACGTATTGAACGGGATGTCAATATTTTGAAAAATCGCATGGACCTTTTCTTAGTGGAGTTCATTCCTGAAGCCAAAGATCTTATTAGCCGTTTACTAAACCCTTACCCTGATCTAAGGCCAAAGGCGAGTGAAGTTTTGTACCATCCTTTTTTCTGGAGTTCCGAGATGCGACTTTCGTTTTTGCGTGACACCAGTGACAGGGTGGAAGTGGAAAACAGAGAGACTAATTCTGATCTTTTGGTGACATTAGAAAGCATTGCCACAGATGCCTTGGGTGGAAAATGGGATGAAAGGATGGAACCAGCTTTCATTGCTAACATCGGTCATTATCGGCGGTATAATTTTAACAGTGTCCGAGACTTGTTGCGAGTTATGAGAAACAAACTAAATCATTACAGAGAATTGCCTCGAGAAATCCAGGAACTTGTAGGAGCTGTTCCCGAAGGGTTCTACGAATACTTTGCAAATAGATACCCAAGACTCTTGATTGAGGTGTATAAAGTTATCCTTCATTATTGCAAGGAGGAAGAATGTTTTCAAAGATATTTTAGATGTGTTGATTAG 2607 0.402 MKFLPLRFSFLFAFLIAFCLVQTSPTTLPKHHKNEECDGHNGLHRPSRSLLSLPPRVATTALVVTLDGTMYLVDRSPGSMKVIWSFSTGSPIYQSYRATVKRDTDKENASAALMSGFVECGDDWSLYMHDRHFGKMRISESITEYVARTPTLSDDGAVTLGSKRSTLFEVDAITGSIIQVYAMPDPVNASAPWSDGRQSVTNIPNINNRDLADPVKLNSPQLLLKIFRTDYSLQSVSPSSGIVLWTMALAEFQAVLLCQHSSSDIEDEYVSDSGLNFTMPYPCQEIRQVFRLKKNLFEPSLMLPLQPNIDRLFTGDDDNIMLPQPLIQITTPREIYLNRTIEWPTLLPLVLFTIFLLAISLIYPLVIKDQETPKDQNSESELKCSPAKKKKTHKSGRKNGIINKRESHMYSENEKVWTEKDNDREVWKHFNHVNENVDGRRVGKLFVSNKEISKGSNGTIVLEGIYEGRAVAIKRLVKAHHDIAFKEIKNLIMSDRHPNIVRWHGVEYDNDFVYLALERCTCNLDDLVQIYSDISVNSAFRKDQDIGCLIKSQIEMGKDSTQCLWKENGYPSPLLLKLMRDIVSGVIHLHELGIIHRDMKPQNVLITKERYLCAKLSDMGISKCLVENMSSLGNNATGGGSSGWQAPEQLVQGRQTRAVDIFSLGCVFFFCITGGRHPFGERIERDVNILKNRMDLFLVEFIPEAKDLISRLLNPYPDLRPKASEVLYHPFFWSSEMRLSFLRDTSDRVEVENRETNSDLLVTLESIATDALGGKWDERMEPAFIANIGHYRRYNFNSVRDLLRVMRNKLNHYRELPREIQELVGAVPEGFYEYFANRYPRLLIEVYKVILHYCKEEECFQRYFRCVD 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03431 868 FunFam Putative Serine/threonine-protein kinase/endoribonuclease IRE1 438 518 - -
Viun3g03431 868 CDD RNase_Ire1 736 864 - -
Viun3g03431 868 Pfam Protein kinase domain 448 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g03431 868 ProSiteProfiles KEN domain profile. 735 866 IPR010513 GO:0004540|GO:0006397
Viun3g03431 868 Pfam Ribonuclease 2-5A 738 864 IPR010513 GO:0004540|GO:0006397
Viun3g03431 868 ProSitePatterns Serine/Threonine protein kinases active-site signature. 594 606 IPR008271 GO:0004672|GO:0006468
Viun3g03431 868 ProSiteProfiles Protein kinase domain profile. 446 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g03431 868 Gene3D - 45 278 IPR015943 GO:0005515
Viun3g03431 868 FunFam Serine/threonine-protein kinase/endoribonuclease IRE1 736 868 - -
Viun3g03431 868 SMART serkin_6 446 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g03431 868 SUPERFAMILY Protein kinase-like (PK-like) 430 756 IPR011009 -
Viun3g03431 868 PANTHER IRE1-RELATED 137 866 IPR045133 GO:0004521|GO:0004674|GO:0030968
Viun3g03431 868 SMART PGNneu 797 851 - -
Viun3g03431 868 FunFam Serine/threonine-protein kinase/endoribonuclease IRE1a 557 734 - -
Viun3g03431 868 Gene3D KEN domain 735 867 IPR038357 -
Viun3g03431 868 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 61 246 IPR011047 -
Viun3g03431 868 Gene3D Transferase(Phosphotransferase) domain 1 558 734 - -
Viun3g03431 868 Gene3D Phosphorylase Kinase; domain 1 431 518 - -
Viun3g03431 868 MobiDBLite consensus disorder prediction 374 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03431 Viun-Chr3 41385173 41393289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03431 468 731 MAP Kinase Kinase Kinase AT3G06030 26.619 2.41e-20 94.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Viun3g03431 Pkinase 5.8e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03431 K08852 - gmx:100788389 1394.79