Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03418 ATGACCCTGCAAGCTGATTCAGCAGCAGCACCACCACCACCTGATTCCGCAACCACAAACAGCGTCGTCCTCAACTTAGAGGAAACCCCTCAACCGCAGCCACAGCCATCGTCTCCGCCTCGTCCACAACCGTCCCGTCCCACGCCTCCGCCAGAACTGCGCCTACCAATATGGTGGCCGGAAGACGGAAATCTCAGCATGGATTGGGTAGAGAACCTGATGTTGTGCTTCGATTGGTGTTCTCGGAATCTCCCTCCGTCGGAGCTACCTTCGGTCCTCCCCGTCAAAGTCTTCGACTCGCTCATCCTCATCGCTTCCAAGATGCTTCACAAGGAACCCAATTGCGTCACCATAGACCCCTTTCGCCCTAGTCCCGACAATAACTCTCCATCTGCCGCCTCCGTCGTTGTCGTCGGTGACGTTCACGGACAACTCCATGATCTTCTCTTCCTTCTCCGAGATGCCGGCTTCCCCTCCCGAGATCGAATCTTTGTCTTCAACGGGGATTACGTGGATCGAGGAGCATGGGGCCTCGAAACCTTCTTGCTGTTGTTGGCTTGGAAGGTATTAATGCCACATAACATATTTCTGCTACGAGGGAATCATGAATCAAAATACTGTACCTCAGTTTATGGTTTTGAGAAAGAAGTAATGGTAAAGTATGGTGATAAAGGTAAGCACGTGTACCGGAAATGTTTGGGGTGCTTTGAAGGTCTTCCTTTGGCTTCTATTATAGCAGGGTGTGTATACACGGCTCATGGAGGACTTTTCCGCAGTGTAACTGTGACGCCGTCAAAGAGGTTTAAAGGAAAGAAGAACCGTAAGATTAATGTCAATCATGATAGCAAAATTCTATCTCTTGGTTCCTTGGAAGAATTGTCTAAGGCTCGACGATCAGTTCTTGATCCTCCTTGGGAAGGTCAAAATTTGATTCCTGGCGATGTTTTGTGGTCTGATCCATCAAAAACCCCGGGTCTTGCTCCAAATAAAGAAAGAGGCATAGGCTTGTTGTGGGGTCCTGATTGTACTGAAGAATTTTTGAAGAAGTACCAACTAAAGTTGATCATCAGATCACATGAAGGCCCTGATGCTAGGGAGAAAAGGGATGGTCTAGATGGAATGGATGAAGGTTACACCATTGACCATACTGTAGATTCTGGAAAGCTGGTCACTGTGTTTAGTGCTCCAGATTACCCACAGTTTCAGGCAACAGAGCAGAGGTATAACAACAAAGGTTCCTATGTTGTCCTTGAACCCCCGAATTTTGACAATCCTATATTTCATGGATTTTCAGCAGTTACTCCCAGGCCGAAGGTACATGCCTATTACGATTACGAAGAGGTGATAGACTCCGATGAAGAATTGGACTTAGCATCCATGGTAACTTCCTGA 1392 0.477 MTLQADSAAAPPPPDSATTNSVVLNLEETPQPQPQPSSPPRPQPSRPTPPPELRLPIWWPEDGNLSMDWVENLMLCFDWCSRNLPPSELPSVLPVKVFDSLILIASKMLHKEPNCVTIDPFRPSPDNNSPSAASVVVVGDVHGQLHDLLFLLRDAGFPSRDRIFVFNGDYVDRGAWGLETFLLLLAWKVLMPHNIFLLRGNHESKYCTSVYGFEKEVMVKYGDKGKHVYRKCLGCFEGLPLASIIAGCVYTAHGGLFRSVTVTPSKRFKGKKNRKINVNHDSKILSLGSLEELSKARRSVLDPPWEGQNLIPGDVLWSDPSKTPGLAPNKERGIGLLWGPDCTEEFLKKYQLKLIIRSHEGPDAREKRDGLDGMDEGYTIDHTVDSGKLVTVFSAPDYPQFQATEQRYNNKGSYVVLEPPNFDNPIFHGFSAVTPRPKVHAYYDYEEVIDSDEELDLASMVTS 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03418 463 MobiDBLite consensus disorder prediction 32 55 - -
Viun3g03418 463 Pfam Calcineurin-like phosphoesterase 134 362 IPR004843 GO:0016787
Viun3g03418 463 ProSitePatterns Serine/threonine specific protein phosphatases signature. 198 203 IPR006186 GO:0016787
Viun3g03418 463 Gene3D - 88 454 IPR029052 -
Viun3g03418 463 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 58 460 - -
Viun3g03418 463 SUPERFAMILY Metallo-dependent phosphatases 89 442 IPR029052 -
Viun3g03418 463 MobiDBLite consensus disorder prediction 1 55 - -
Viun3g03418 463 SMART pp2a_7 93 437 IPR006186 GO:0016787
Viun3g03418 463 FunFam Serine/threonine-protein phosphatase 77 458 - -
Viun3g03418 463 CDD MPP_PP7 59 444 IPR041754 -
Viun3g03418 463 PRINTS Serine/threonine phosphatase family signature 134 161 IPR006186 GO:0016787
Viun3g03418 463 PRINTS Serine/threonine phosphatase family signature 197 221 IPR006186 GO:0016787
Viun3g03418 463 PRINTS Serine/threonine phosphatase family signature 234 260 IPR006186 GO:0016787
Viun3g03418 463 PRINTS Serine/threonine phosphatase family signature 294 321 IPR006186 GO:0016787
Viun3g03418 463 PRINTS Serine/threonine phosphatase family signature 164 191 IPR006186 GO:0016787
Viun3g03418 463 PRINTS Serine/threonine phosphatase family signature 388 404 IPR006186 GO:0016787
Viun3g03418 463 MobiDBLite consensus disorder prediction 13 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03418 Viun-Chr3 41144892 41150195 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03418 48 354 Calmodulin-binding Proteins AT5G63870 70.130 3.09e-155 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03418 K04460 - gmx:100810695 803.897