Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03318 ATGAAGGCCAGTAGAATGGGCCAATGGTTAAGTGTGCTAATATGTGTGCTACTATTACTAAAGGCAGAAGGGGTTCCTGTGGGAATCACTTTTGTTGAAAATGCAGTGGCAAAAGGAGCTGTTTGTTTGGATGGGAGTCCACCAGCTTACCACTTCCATAAGGGTTCTGGAGCAGGGATTAACAACTGGATTGTTCACTTTGAGGGAGGAGGATGGTGCAACAACGTCACTTCTTGCCTTTCTCGTAGGGACACTCGATTAGGCTCATCTAAGAAAATGGATACCCAACTTTCCTTTTCTGGATTTTTTAGTAACAGTAAAAAGTTCAATCCAGATTTCTATGATTGGAACAGAATCAAGGTTAGGTATTGTGATGGGTCATCATTTACTGGTGATGTTGAAGCTGTTGATCCAGCAACCAATTTGCACTTCAGAGGAGCAAGGGTTTTTGCTGCCGTTGTTGATGATTTACTTGCAAAAGGAATGAAAAACGCTCAAAATGCAATTATCTCTGGATGTTCTGCTGGAGGATTGGCTGCAATTTTAAACTGTGATCGATTCAAATCACTGCTACCTGGAACAACTAAAGTGAAATGCCTTGCAGATGCTGGTTATTTTATCAATGTCAAGGATGTCTCTGGGGCACAGCGCATTGAAGAGTTCTACAGTCAAGTTGTTCAAACACATGGCTCAGCTAAGAATTTGCCTGCATCCTGCACTTCAAGACTCAGACCAGGGCTGTGCTTTTTCCCACAAAATGTGGTATCACAAATCAGTACGCCAATCTTCTTCGTAAATGCAGCCTATGATTCATGGCAGATCAAAAACATTGTGGCACCAGGTGCTGCTGATCCCCATGGCACCTGGCGTGAATGCAAGCTTGATATAAAAAACTGCTCACCAAATCAACTCAGTGTAATGCAAGTATTCAGGACTGATTTCCTAAGGGCATTTGGTTCTGTTGGGAACTCTCCATCAAAAGGGCAATTCATAGATGGTTGCTATGCTCACTGCCAAACTGGAACACAAGAGACATGGCTGAGAAATGACTCTCCTGTGTTAGGCGGCACAACAATTGCAAAGGCAGTTGGAGACTGGTATTATGATCGAAAGCCATTTAAACAGATAGATTGTGCCTACCCTTGCAACCCAACTTGCCACAATCGTATTTTTGATCAGAATTAG 1185 0.4287 MKASRMGQWLSVLICVLLLLKAEGVPVGITFVENAVAKGAVCLDGSPPAYHFHKGSGAGINNWIVHFEGGGWCNNVTSCLSRRDTRLGSSKKMDTQLSFSGFFSNSKKFNPDFYDWNRIKVRYCDGSSFTGDVEAVDPATNLHFRGARVFAAVVDDLLAKGMKNAQNAIISGCSAGGLAAILNCDRFKSLLPGTTKVKCLADAGYFINVKDVSGAQRIEEFYSQVVQTHGSAKNLPASCTSRLRPGLCFFPQNVVSQISTPIFFVNAAYDSWQIKNIVAPGAADPHGTWRECKLDIKNCSPNQLSVMQVFRTDFLRAFGSVGNSPSKGQFIDGCYAHCQTGTQETWLRNDSPVLGGTTIAKAVGDWYYDRKPFKQIDCAYPCNPTCHNRIFDQN 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03318 394 SUPERFAMILY alpha/beta-Hydrolases 141 274 IPR029058 -
Viun3g03318 394 Pfam Pectinacetylesterase 21 372 IPR004963 GO:0016787
Viun3g03318 394 PANTHER NOTUM-RELATED 11 388 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03318 Viun-Chr3 40372584 40377364 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03318 5 391 Carbohydrate Esterase AT4G19420 61.137 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03318 K19882 - gmx:100781246 748.814