Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03317 ATGAAGAGCGGAAGAATGATCCAATGGTTAAATCTTGTAGCCTGTGTACTGCTATTGCTTAAGGCAGAAGGATCTTTGGTTCCATTGACTTTGGTCGAGAATGCACTGTCGAAAGGAGCTGTTTGTTTGGATGGAAGTCCCCCAGCTTACCACTTTGATAAGGGAACTGGAGAAGGGATTAACAACTGGATTGTTCACATGGAGGGAGGAGGATGGTGCAAAGATGCCGACGATTGCCTTGGGCGTAAAGATACTCGCTTAGGTTCATCTAACCAAATGGTTGAGGATCTTTACTTTTCTGGAATTTTAGGCAACGACCGAGGGTATAATCCAGATTTCTACAATTGGAACAGAGTCAAGATTAGGTACTGTGATGGGTCATCGTTTACTGGTGATGTCGAAGAAGTTGATCCGACAAACAATTTGTACTTTAGAGGAGCAAGGATTTTTTCAGTTGTAATGGAAGATTTATTAGCAAAAGGAATGGACAAGGCTGAAAATGCTATTCTCTCTGGCTGTTCAGCTGGAGGATTGACTACTATATTACACTGTGACAATTTTAAAGCTCTGTTACCTTCTGGAGCTACTGTAAAATGTGTTCCAGATGCTGGTTTTTTTATCAATGTAGAGGATATCTCAGGAACACGTTTCATTGAAGATTATTACAGTAAAGTTGTGTCCACACATGGCTCGACAAAGAATTTGCCCTCATCTTGCACTTCCAAACTCAGCCCAGGACTGTGCTTTTTCCCACAATATGTGGTATCACATATCAGTACCCCAATCTTCATAGTAAATTCAGCCTATGACTCATGGCAGATTCGGAACATCTTGGCACCTGGTGCTGCTGATCCCAGTGACAGTTGGCATAGCTGCAAGCTTGATTTAAGCAAATGCTCACATGATCAACTAAGTATAGTGCAAGGCTTCAAGAAGGAATTCGAGAAGGCAGTGAGTGTGGTTGGAGACTCTCCATCTAGAGGAATGTTTATAGATTCTTGCTTTGACCACTGTCAAACAGAATCACAGGAAACATGGTTTAAAAGTGACTCACCACATCTTGCCAATACATCAATTGCCAAGGCAGTAGGAGACTGGTTTTATGGTCGAGGTCCTTTCAATGAAGTAGATTGCAACTATCCTTGCAACCCCACTTGTCAGAACCTTGTTTCTGATCTAAAGGACCACCCTGGAATATAG 1200 0.4217 MKSGRMIQWLNLVACVLLLLKAEGSLVPLTLVENALSKGAVCLDGSPPAYHFDKGTGEGINNWIVHMEGGGWCKDADDCLGRKDTRLGSSNQMVEDLYFSGILGNDRGYNPDFYNWNRVKIRYCDGSSFTGDVEEVDPTNNLYFRGARIFSVVMEDLLAKGMDKAENAILSGCSAGGLTTILHCDNFKALLPSGATVKCVPDAGFFINVEDISGTRFIEDYYSKVVSTHGSTKNLPSSCTSKLSPGLCFFPQYVVSHISTPIFIVNSAYDSWQIRNILAPGAADPSDSWHSCKLDLSKCSHDQLSIVQGFKKEFEKAVSVVGDSPSRGMFIDSCFDHCQTESQETWFKSDSPHLANTSIAKAVGDWFYGRGPFNEVDCNYPCNPTCQNLVSDLKDHPGI 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03317 399 Pfam Pectinacetylesterase 21 371 IPR004963 GO:0016787
Viun3g03317 399 PANTHER NOTUM-RELATED 9 388 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03317 Viun-Chr3 40335387 40339006 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03317 5 399 Carbohydrate Esterase AT4G19420 55.349 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03317 K19882 - gmx:100780707 679.863