Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03312 ATGCAAAACAAACTCACTCCCGATTACTACAAAAAAACCTGTCCCAACTTCCTCGAAACCGTCCGAAAAATCGTTAAAGAAAAACAACATAACACGCCCTCCACCGCCGCCGCCACCCTCCGCCTCCTCTTCCACGACTGCATGGTCGGCGGCTGCGACGCCTCCATCCTCGTCACCTCCAACGCCTACAACACCGCCGAGCGCGACCACGCCGTCAACCTCCAACTCTCCGGCGACGGCTTCGACGCCGTCTTGCGTGTCAAGAACGTCCTCGAGCTGGAGTGCCCGAACGTCGTCTCGTGCGCCGACATCCTCGCCGCTGCCGCCAGTGAACTGGTGGCGAACTCCGGCGGACCCACCTTCACGGTCCAATTCGGGCGAAAAGACTCCCTGGAATCGAAAATCTCCAGCTCGGAAAACCAGTTCCCGTTACCGAACATGACTATGTCCCAAGTGATCCCCCTCTTCGCCAAAAAAGGGTTCTCCGTGCAGGAAATGGTGGCCCTGATCGGCGCACACACCATAGGGATGTCGCACTGCGACCAGTTCGTCCACAGGCTCTTCCGCTTCAGCAAAACTTCGGAAACTGACCCCGCCTATAACCCGGAGTACGCGGCGGGGCTGAGGAAACTCTGCGAGAACTACACGAAGGACCCTACCATGGCGGCTTACAATGACGTGATAACTCCGGTGAAGTTCGACAACATGTATTTCAAGAACTTGCGGCGAGGGTTGGGGTTGCTGGCCACTGACACTGCCCTCTTCACTGATCCCAGAACGAAGCCCTTCGTTGAGAAATACGCCGATGATGAAGCCAAGTTCTTCCAGGACTTCGCTCTTGCCATCGAAAAACTCAGCGCCTTGGACGTCAAAACCGGAAAGGATGGAGAGGTTCGGAACAGATGTGATGCCTTCAACGCGCTTTATGGGTGA 933 0.5638 MQNKLTPDYYKKTCPNFLETVRKIVKEKQHNTPSTAAATLRLLFHDCMVGGCDASILVTSNAYNTAERDHAVNLQLSGDGFDAVLRVKNVLELECPNVVSCADILAAAASELVANSGGPTFTVQFGRKDSLESKISSSENQFPLPNMTMSQVIPLFAKKGFSVQEMVALIGAHTIGMSHCDQFVHRLFRFSKTSETDPAYNPEYAAGLRKLCENYTKDPTMAAYNDVITPVKFDNMYFKNLRRGLGLLATDTALFTDPRTKPFVEKYADDEAKFFQDFALAIEKLSALDVKTGKDGEVRNRCDAFNALYG 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03312 310 Gene3D - 8 306 - -
Viun3g03312 310 PRINTS Plant peroxidase signature 38 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun3g03312 310 PRINTS Plant peroxidase signature 117 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun3g03312 310 PRINTS Plant peroxidase signature 224 239 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun3g03312 310 PRINTS Plant peroxidase signature 164 176 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun3g03312 310 PRINTS Plant peroxidase signature 98 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun3g03312 310 PRINTS Plant peroxidase signature 79 92 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun3g03312 310 PRINTS Plant peroxidase signature 240 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun3g03312 310 PRINTS Plant peroxidase signature 14 33 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun3g03312 310 PRINTS Plant peroxidase signature 280 293 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun3g03312 310 ProSiteProfiles Plant heme peroxidase family profile. 4 306 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun3g03312 310 Pfam Peroxidase 21 270 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun3g03312 310 FunFam Peroxidase 143 285 - -
Viun3g03312 310 ProSitePatterns Peroxidases proximal heme-ligand signature. 165 175 IPR019793 -
Viun3g03312 310 PRINTS Haem peroxidase superfamily signature 36 50 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun3g03312 310 PRINTS Haem peroxidase superfamily signature 117 129 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun3g03312 310 PRINTS Haem peroxidase superfamily signature 165 180 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun3g03312 310 PRINTS Haem peroxidase superfamily signature 226 241 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun3g03312 310 PRINTS Haem peroxidase superfamily signature 99 116 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun3g03312 310 PANTHER - 3 306 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun3g03312 310 Gene3D Peroxidase, domain 2 143 285 - -
Viun3g03312 310 ProSitePatterns Peroxidases active site signature. 36 47 IPR019794 GO:0004601
Viun3g03312 310 SUPERFAMILY Heme-dependent peroxidases 5 306 IPR010255 GO:0004601|GO:0006979|GO:0020037
Viun3g03312 310 CDD secretory_peroxidase 4 305 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03312 Viun-Chr3 40156654 40157651 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03312 2 306 Peroxidase AT5G40150 54.426 5.78e-127 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03312 K00430 - gmx:100781063 459.914