Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03300 ATGAAGGCGGAACCACCGGCAGCGCTCCTCATGTCGGTTTCCTGCATCTCCGACTACGACCTCCTCTGCGCCGACGAAAACTCCGGTATCCTCTCCGGAGAGTCGCCGGAATGCTCGTCCGATGTGGACTCCACTGCCCCGCCGCCGTCGCCACCGTCCTCGGAAGACTATTCAATCGCCAGTTTCATCGAACACGAACGCAACTTTGTCCCCGGATTCGACTACCTCTCCAGGTACCAATCTCGCTCCCTCGACGCCGACGCCAGAGAGGAATCCGTTGCATGGATTCTCAAGGTACACGCGTATTATGACTTTCAACCTTTGACGGCGTACCTTGCCGTCAACTATATGGACCGATTTATGGATTCTCGCCAGTTACCGCAAACAAATGGGTGGCCTCTGCAACTTCTATCTGTTGCATGTTTGTCTTTGGCAGCAAAGATGGAGGAACCTCTGGTTCCATCTCTGTTGGACCTTCAGATAGAAGGTGCCAAGTACATATTTGAGCCGAGAACAATTCGTAGGATGGAGCTACTTGTTCTGGGTGTCTTGGATTGGAGGCTAAGATCAGTAACCCCACTTTGTTTTCTCGCTTTCTTTGCGTGCAAAATAGATTCAACTGGAGCTTTTACCGGGTTCCTCATTTCCCGGGCTACAGAAATCATCGTGGCTAATATCCAAGAGGCTGGCTTTCTTGCTTACAGGCCATCATGCATTGCTGCCGCAGCCATACTTTCTGCGGCTAAGGAAATTCCTAATTGGGCTGCCCTTAAGCCTGAGCATGCTGAGTCATGGTGCGAGGGACTAAGAAAAGAAAAAATTATTGGGTGCTACCAGTTGATGCAAGAACTTGTGGTTAACAGTAACCGTAGAAAACTCCCTTTGGTGTTGCCGCAGTTGCGAGTAACAACTCGGACTCGAATGAGGTCAAGTGTCTCATCATTCTCATCGTCATCCTCCTTCTCCTTGTCTTGTAAGAGGAGGAAATTAAATAACTGTTTGTGGGTAGATGACAAAGGAAACTCCGAGTGA 1032 0.4981 MKAEPPAALLMSVSCISDYDLLCADENSGILSGESPECSSDVDSTAPPPSPPSSEDYSIASFIEHERNFVPGFDYLSRYQSRSLDADAREESVAWILKVHAYYDFQPLTAYLAVNYMDRFMDSRQLPQTNGWPLQLLSVACLSLAAKMEEPLVPSLLDLQIEGAKYIFEPRTIRRMELLVLGVLDWRLRSVTPLCFLAFFACKIDSTGAFTGFLISRATEIIVANIQEAGFLAYRPSCIAAAAILSAAKEIPNWAALKPEHAESWCEGLRKEKIIGCYQLMQELVVNSNRRKLPLVLPQLRVTTRTRMRSSVSSFSSSSSFSLSCKRRKLNNCLWVDDKGNSE 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03300 343 CDD CYCLIN_AtCycD-like_rpt2 191 281 - -
Viun3g03300 343 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 15 - -
Viun3g03300 343 Pfam Cyclin, C-terminal domain 191 298 IPR004367 -
Viun3g03300 343 Gene3D - 61 252 - -
Viun3g03300 343 SMART cyclin_7 94 182 IPR013763 -
Viun3g03300 343 FunFam D2/4-type cyclin 72 189 - -
Viun3g03300 343 Gene3D - 72 189 - -
Viun3g03300 343 Pfam Cyclin, N-terminal domain 60 188 IPR006671 -
Viun3g03300 343 SUPERFAMILY Cyclin-like 173 286 IPR036915 -
Viun3g03300 343 PANTHER CYCLINS 59 289 IPR039361 -
Viun3g03300 343 SMART Cyclin_C_2 191 324 IPR004367 -
Viun3g03300 343 SUPERFAMILY Cyclin-like 58 188 IPR036915 -
Viun3g03300 343 ProSitePatterns Cyclins signature. 89 120 IPR006671 -
Viun3g03300 343 MobiDBLite consensus disorder prediction 33 55 - -
Viun3g03300 343 CDD CYCLIN_AtCycD-like_rpt1 88 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03300 Viun-Chr3 40024502 40028588 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03300 9 342 Core Cell Cycle Gene Families AT1G70210 59.763 6.56e-132 378