Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03270 ATGGATCTGGAACGTGGGATTCTTCAAAACTCTTCTAAGGGGAAAGAATCATGGAAAACTGTTCTGACTCTGGCATATCAGAGTCTTGGAGTTGTGTATGGGGAGATAAGCACTTCACCGCTCTACGTGTACAGGAACACCTTTGCTGAAGATATTGGTCACTCTGAGACCAATGAAGAGATTTATGGTGTTTTGTCTTTGGTGTTCTGGACTCTTACATTGGTGCCTTTGGTGAAGTATGTGTTCATAGTGCTGAGAGCTGATGACAATGGTGAAGGTGGCACGTTTGCACTGTACTCTTTGCTGTGTCGCCATGCCAAAGTTGGATTGTTGCCTAATTGCCAATTGGCAGATGAGGAGCTCTCGGAGTACAAGAACCATAGCTGTGGTGTGGCAGCAGAGAGAAGCCTCGCCTCCAGCCTCAAGACCTTGTTGGAGAGGCACAAGGTCTTGCAGAGGATTTTGCTTGTGCTGGCTTTGTTAGGGACTTGCATGGTGATTGGTGTTGGAGTCCTTAAACCTGCTATTTCTGTTTTCTCGGCTGTGTCTGGACTAGAGCTTTCAATGTCCAAGGAGCATCACAGATATGTGGAAGTTCCAGGTGCATGCATCATATTAATTGGCTTGTTTGCCCTTCAACGTTATGGCACAAACAGGGTTGGGTTTTTGTTTGCTCCCATAGTATGTGTGTGGCTCTTCTGCATCAGTGCCATTGGTCTATACAATATCTTTTACTGGAACCCTCATGTGTACAAAGCACTGTCTCCATATTATGTTTTCCAATTTTTAAAGAAGACTAGAAGAGGAGGATGGATGGCCCTTGGTGGAATTTTGCTCTGCATAACAGGATCAGAAGCCATGTTTGCTGGTCTCGGGCATTTTTCTCAGCTATCAATCAAGATTGCTTTCACCTCTCTGGTTTATCCATCTCTAGTTCTCGCTTATATGGGGCAAGCTGCTTATTTTTCTAGACATCATGATGTTGAGCAAGAGTATCACTTTGGCTTTTACGTATCTGTACCAGAGAAGTTGAGATGGCCTGTTCTGGTGATAGCCATTCTCGCTGCAGTTGTGGGAAGCCAATCCATCATCACCGGAACATTCTCAATCATCAGGCAATGCTCTGCATTGAGTTGCTTCCCTAGAGTGAAAGTGGTTCACACTTCATCAAAAATCCATGGACAAGTTTATATCCCTGAGATCAATTGGTTGTTGATGCTCTTGTGTTTGGCTGTAACTATTGGCTTCAGAGACACAAAGCTTATGGGTAATGCATCAGGTTTGGCAGTTGTCTCAGTGATGCTAGTGACCTCTTGTTTGATGTCACTGGTTATTGTAATCTGCTGGCACAAGAATGTTGTGCTTGCAGTTGGGTTTGTTCTCTTTTTTGGGTCAATTGAGGCCCTCTTCTTCTCAGCTTCTGTGATGAAGTTCTTTGAAGGAGCATGGGTGCCAGTTGCTTTGGCATTTGTGTTTCTCTCAGTGATGTGTGTGTGGCATTACGGCACTTTGAAAAAGTATGAATTTGATGTTCAAAACAAGGTTTCAATCAGCTGGTTACTCAGCCTTGGCCCTAGCTTAGGGTTCGCAAGAGTACGTGGGATTGGGCTTGTGCACACAGAGCTAGTATCTGGAATTCCTGCTATTTTCTCCCACTTTGTGACCAACCTACCAGCATTCCACCAAGTCCTTGTTTTCCTATGCATCAAGCATGTGCCAGTTCCACATGTTAAACCCGAGGAAAGGTTTCTAGTTGGTCGTGTAGGTCCCAGAGATTTCAGAATCTACAGGTGCATAGTGAGATATGGATACCATGATGTCCACAAAGATGATAACGAGTTTGAGAAAGACCTTGTGTGCAGCATAGCAAAGTTCATACAAGCAGGAAGTGGTGGATGCAACTCTTCAAATGATGATCCTGAAAAGTGTGGTGGAAACATGACGGTTGTTGGAAGCTGTTCTACTAGCCACCCCGTTGATGCGGAGTTGGGTGAGAGCTCAGAATCAGAGAGGGTGATGAAAGCAAAGAAAAGGGTGAGGTTCATTGTGCCTGAGAGTCCAAAGATCGACACTGGTGCAATGGAGGAGTTGAAAGAGCTTATGGAAGCAAGGGAAGTTGGAGTGGCCTACATTTTAGGACAGTCCTACATGAGGGTTAAACCAGGGTCCAGCATGCTGAAGAAGTTGGTTATAAATTTTGGATATGAATTCTTGAGGAAAAATAGCAGGGAACCTTCCTCTGTACTTAGTGCTCCTCATGCATCATCTTTGGAGGTTGGGATGATGTATCATGTTTAA 2298 0.4456 MDLERGILQNSSKGKESWKTVLTLAYQSLGVVYGEISTSPLYVYRNTFAEDIGHSETNEEIYGVLSLVFWTLTLVPLVKYVFIVLRADDNGEGGTFALYSLLCRHAKVGLLPNCQLADEELSEYKNHSCGVAAERSLASSLKTLLERHKVLQRILLVLALLGTCMVIGVGVLKPAISVFSAVSGLELSMSKEHHRYVEVPGACIILIGLFALQRYGTNRVGFLFAPIVCVWLFCISAIGLYNIFYWNPHVYKALSPYYVFQFLKKTRRGGWMALGGILLCITGSEAMFAGLGHFSQLSIKIAFTSLVYPSLVLAYMGQAAYFSRHHDVEQEYHFGFYVSVPEKLRWPVLVIAILAAVVGSQSIITGTFSIIRQCSALSCFPRVKVVHTSSKIHGQVYIPEINWLLMLLCLAVTIGFRDTKLMGNASGLAVVSVMLVTSCLMSLVIVICWHKNVVLAVGFVLFFGSIEALFFSASVMKFFEGAWVPVALAFVFLSVMCVWHYGTLKKYEFDVQNKVSISWLLSLGPSLGFARVRGIGLVHTELVSGIPAIFSHFVTNLPAFHQVLVFLCIKHVPVPHVKPEERFLVGRVGPRDFRIYRCIVRYGYHDVHKDDNEFEKDLVCSIAKFIQAGSGGCNSSNDDPEKCGGNMTVVGSCSTSHPVDAELGESSESERVMKAKKRVRFIVPESPKIDTGAMEELKELMEAREVGVAYILGQSYMRVKPGSSMLKKLVINFGYEFLRKNSREPSSVLSAPHASSLEVGMMYHV 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03270 765 Pfam K+ potassium transporter 26 606 IPR003855 GO:0015079|GO:0016020|GO:0071805
Viun3g03270 765 NCBIfam potassium uptake protein 24 765 IPR003855 GO:0015079|GO:0016020|GO:0071805
Viun3g03270 765 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 12 764 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03270 Viun-Chr3 39638454 39643157 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03270 1 765 Inorganic Solute Cotransporters AT1G70300 71.646 0.0 1162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03270 K03549 - gmx:100784861 1392.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g03270 3 39638454 39643157 Viun3g03270 3 39638454 39643157 ECH
Viun2g01209 2 22812373 22817517 Viun3g03270 3 39638454 39643157 PCT