Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03268 ATGAAGGGGGATAGGATTGAAGAGATCAGCACGAGGTTGTTGGGTAGAAGCAGCAGTGGTGGGAGCAGTGAGTCAAGGTGGGTCGATGGCAGTGAAGTGAACTGGGATGAGGTTCCTGTGTGGCCAAAGCGTGATGATGGCAGAGAAGGGTTTGGGTCAGTCAGAAGGAGGCTTTCCAAATTGCCCAAGAGGGTTGACTCATTTGATGTTGAAGCCATGGAGATTGCTGGAACTCATGCTCACCACTCCAAGGCCCTTTCCTTCTGGCCTACACTTGCTTTGGCATTTAAGACTCTTGGTGTGGTATATGGTGACATGGGAACAAGTCCTCTGTATGTTTTTGCCGATGTCTTCAGCAAGGTTCCAATTAGGTCAGATGATGATGTCTTGGGGGCATTATCTTTAATAATGTATACAATAGCAATTATTCCGTTGGCCAAGTATGTTTTTATAGTCCTCAAAGCCAATGATAATGGAGAAGGAGGAACCTTTGCACTATACTCGTTGATTTGCAGGTATGCAAATGTGAGTATGCTTCCAAATCGTCAACAAGCTGATGAATATATATCTAGTTTTAAGCTCAAACTGCCTACTCCAGAACTAGAAAGGGCTCTAAAAATAAAGGATACTTTGGAAAAAACATCATTTTTGAAGAACCTTATATTGGTGTTGGTTCTTGTGGGAGCTTCCATGATTATTGGAGATGGTATTCTAACCCCAGCAATATCAGTGATGTCTGCCATAAGTGGTCTGCAGGATCAAATAAAAGGTTTTGGTACTGGTGAAGTGGTTGGTATTTCTATTGTAGTCCTGATGGCTTTGTTCAGCATTCAACGGTTTGGTACCGGTAAAGTGGGTTTCTTGTTTGCCCCTATACTTGCCTTATGGTTCTTTTCTCTGGGTTCTATTGGAGTATATAATATACTTAAATATGATATCACTGTTCTGAGAGCATTCAATCCAGCTTATATCTATTTTTTCTTCAAGAGAAATGGTAAAGCTGCATGGTCATCTCTTGGTGGTTGCGTTCTGTGCATTACAGGTGCGGAAGCAATGTTTGCAGATTTGGGTCATTTTTCTGTACCCGCAATACAGATTGCTTTTACATGCGTGGTATTTCCCTGCCTCCTCCTTGCATATATGGGTCAAGCTGCTTTTTTGACGAAGAACCCAAGTTCTTATTCAAGCATCTTCTACAAGTCGGTTCCAGAGAGTCTTTTCTGGCCAGTGTTTGTGGTAGCCACACTTGCTGCTATGATTGCCAGCCAAGCAATGATATCTGCTACATTTTCGTGCATAAAGCAATCTATGGCTTTGGGATGCTTCCCCAGGCTGAAGATAATTCACACCTCAAAAAAGTTCATTGGTCAAATTTATATCCCCGTTGTTAATTGGTTTCTGATGATTATGTGCATAGTTGTGGTTTCAATATTTCAAAGCACAACTGATATTGCGAATGCATATGGAATTGCTGAAGTTGGTGTCATGATGGTGAGCACCATCTTGGTGACCCTTGTAATGGTTTTAATTTGGCAGACTAACTTGCTTTTGGCATTGTGTTTCTGTCTTGGATTTGGTTCAGTGGAGTTAATTTACATGTCTTCTGTCCTATCCAAAATCTTTGAGGGTGGCTGGCTTCCACTAGCCTTTGCTACCCTTTTCTTATCTGTGATGTACACTTGGAACTATGGCAGTGTATTGAAGTACCGAAGTGAAGTTAGAGAGAAGGTTTCAGTGGACACAATGCTTGAGCTTGGCTCGAATCTCGGAACAGTAAGAGTGCCAGGTGTAGGATTGCTATATAACGAGCTTGTGCAGGGCATTCCCTCCATTTTTTTGCAGTTCTTGCTGAACCTTCCTGCTCTTCACTCAACTATAGTCTTTGTCTGCATCAAATATGTCCCAATCCCAGTGGTTCCTCAAGAGGAAAGATTTCTATTTCGAAGAGTTTGCCCCAAAGATTACCACATATTCCGGTGTGTTGCCAGATATGGTTACAAAGATGTAAGGAAGGAAGATCACCAAGCATTTGAGCAACTTCTTATTGAGAGTCTTGAGAAATTCTTGAGAAGGGAAGCTCTTGACTCAGCCTTGGAGTTGGAGGGCAACTTAACTGAGGAATTAGACAGTGTCTCAGCAAATGCAAGGGAATCTGATGTTCCTGTTGATACTGGTGCTGATGAGCTTAGTATTCCTCTGATGCATGATCAGAAACTAGAAGAAACAGGAACTTCTTCTGCTGCTCAAGAAGTTGCATCAACATTGCCATCTAGTTACATGTCATCAGATGAAGATCCTAGTCTTGAATATGAACTTTCAGCCCTTAGAGAAGCAACGGAATCAGGATTCACCTATTTGCTTGGACATGGAGATGTGAGGGCAAAGAAAAACTCCTTTTTCTTTAAGAAACTAATGATAAATTATTTCTATTCATTTCTCAGAAATAACTGCAGAGGAGGTACTGCAAACATGAGAGTACCTCACACCAATATCATTCAAGTTGGGATGACATATATGGTCTGA 2523 0.4166 MKGDRIEEISTRLLGRSSSGGSSESRWVDGSEVNWDEVPVWPKRDDGREGFGSVRRRLSKLPKRVDSFDVEAMEIAGTHAHHSKALSFWPTLALAFKTLGVVYGDMGTSPLYVFADVFSKVPIRSDDDVLGALSLIMYTIAIIPLAKYVFIVLKANDNGEGGTFALYSLICRYANVSMLPNRQQADEYISSFKLKLPTPELERALKIKDTLEKTSFLKNLILVLVLVGASMIIGDGILTPAISVMSAISGLQDQIKGFGTGEVVGISIVVLMALFSIQRFGTGKVGFLFAPILALWFFSLGSIGVYNILKYDITVLRAFNPAYIYFFFKRNGKAAWSSLGGCVLCITGAEAMFADLGHFSVPAIQIAFTCVVFPCLLLAYMGQAAFLTKNPSSYSSIFYKSVPESLFWPVFVVATLAAMIASQAMISATFSCIKQSMALGCFPRLKIIHTSKKFIGQIYIPVVNWFLMIMCIVVVSIFQSTTDIANAYGIAEVGVMMVSTILVTLVMVLIWQTNLLLALCFCLGFGSVELIYMSSVLSKIFEGGWLPLAFATLFLSVMYTWNYGSVLKYRSEVREKVSVDTMLELGSNLGTVRVPGVGLLYNELVQGIPSIFLQFLLNLPALHSTIVFVCIKYVPIPVVPQEERFLFRRVCPKDYHIFRCVARYGYKDVRKEDHQAFEQLLIESLEKFLRREALDSALELEGNLTEELDSVSANARESDVPVDTGADELSIPLMHDQKLEETGTSSAAQEVASTLPSSYMSSDEDPSLEYELSALREATESGFTYLLGHGDVRAKKNSFFFKKLMINYFYSFLRNNCRGGTANMRVPHTNIIQVGMTYMV 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03268 840 MobiDBLite consensus disorder prediction 1 29 - -
Viun3g03268 840 Pfam K+ potassium transporter 95 668 IPR003855 GO:0015079|GO:0016020|GO:0071805
Viun3g03268 840 MobiDBLite consensus disorder prediction 12 29 - -
Viun3g03268 840 MobiDBLite consensus disorder prediction 742 764 - -
Viun3g03268 840 NCBIfam potassium uptake protein 94 840 IPR003855 GO:0015079|GO:0016020|GO:0071805
Viun3g03268 840 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 85 838 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03268 Viun-Chr3 39617102 39623140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03268 4 840 Inorganic Solute Cotransporters AT1G60160 73.810 0.0 1244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03268 K03549 - gmx:100814419 1508.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g03268 3 39617102 39623140 Viun2g01209 2 22812373 22817517 PCT