Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03220 ATGGAGGTGGAAATCCCAGGTGCAGCTGTGAAAGAATCGGAGCAACAGAAGTTTGCTCTACCTGTGGATTCTGAACACAAGGCCACCGAGTTCAGATTATTTTCCATAGCTAAACCCCACATGAGATCTTTTCACCTATCATGGATCTCATTCTTCTCCTGCTTTGTGTCTAGCTTTGCTGCCCCACCCCTCCTTCCCATAATCCGGGACAACCTTAACCTCACAGCCACTGACATTGGAAATGCCGGTGTTGCATCGGTTTCCGGTGCAGTTTTCGCAAGAATTGCAATGGGAACAGCTTGTGACTTAGTTGGACCGCGCCTGGCCTCTGCATCACTCATCCTCCTCACAGCACCATTTGTGTACTTCACTTCCATCATCAACTCAGCCACCTCGTACCTCCTTGTCCGTTTCTTCACCGGCTTCTCCCTGGCCACCTTTGTCTCCACACAGTTCTGGATGAGCTCTATGTTCTCCGCTCCGGTCGTGGGTTCGGCAAACGGGTTTGCCGGCGGATGGGGCAACCTTGGAGGAGGAGCCACCCAACTGATCATGCCCCTTGTCTTCTCCCTCATCCGTGACATCGGTGCTACGAAATTCACGGCATGGAGGATTGCGTTCTTTGTCCCTGCCATGTTCCAGATGCTGACGGCATTTTCAATCCTGATATTTGGGCAGGACATGCCCGATGGAAACTTTCAGCGGTTGAAGAAGTCAGGGGAGAAAGCAAAAGACGAATTCTCAAGAGTGGTGTATCATGGGATTACTAACTACAGAGGGTGGATTCTGGCGTTGACTTACGGCTACTGCTTCGGGGTGGAGTTGACCATAGACAACATCATAGCTGAATACTTCTATGACAGGTTTAATCTGAAACTCCACACTGCAGGAATCATTGCTGCGAGCTTTGGGTTGGCTAACTTGTTTTCTAGACCTGGTGGGGGTTATATATCAGATGTAATGGGAAAGAGGTTCGGCATGAGAGGGAGGTTGTGGGCTTTATGGCTGTGCCAAACCTTGGCTGGTGTCTTCTGCATCATCCTTGGCCTTGTCGGTTCTTTAGGTGTCTCCGTCCTTGTTATGATCATATTCTCTCTCTTTGTCCAAGCCGCATGTGGAATGACCTTTGGGATTGTTCCCTTTGTCTCAAGAAGGTCATTGGGGGTGATATCTGGAATGACAGGAGGAGGAGGCAATGTGGGTGCAGTGGTGACCCAGCTAATTTTCTTCAAAGGATCGAAGTTTTCAAAAGAAAGAGGAATAACTCTAATGGGAGTGATGATCATAATATGCACTCTGCCAATGTGTTTAATCTATTTTCCACAGTGGGGTGGGATGTTTTGTGGTCCATCGTCTAAGAAGGTGACAGAAGAAGATTACTACTTAGCTGAGTGGAACTCAAAGGAGAAGGAGAAAGGGTCCCATCATGCAAGCTTGAAATTTGCTGATAACAGCAGAAGAGAAAGAGGAAAAAAACTGAATGCATCAACAGAGCCTTCTGAGGAGATCACACCTCCACATGTTTGA 1527 0.4813 MEVEIPGAAVKESEQQKFALPVDSEHKATEFRLFSIAKPHMRSFHLSWISFFSCFVSSFAAPPLLPIIRDNLNLTATDIGNAGVASVSGAVFARIAMGTACDLVGPRLASASLILLTAPFVYFTSIINSATSYLLVRFFTGFSLATFVSTQFWMSSMFSAPVVGSANGFAGGWGNLGGGATQLIMPLVFSLIRDIGATKFTAWRIAFFVPAMFQMLTAFSILIFGQDMPDGNFQRLKKSGEKAKDEFSRVVYHGITNYRGWILALTYGYCFGVELTIDNIIAEYFYDRFNLKLHTAGIIAASFGLANLFSRPGGGYISDVMGKRFGMRGRLWALWLCQTLAGVFCIILGLVGSLGVSVLVMIIFSLFVQAACGMTFGIVPFVSRRSLGVISGMTGGGGNVGAVVTQLIFFKGSKFSKERGITLMGVMIIICTLPMCLIYFPQWGGMFCGPSSKKVTEEDYYLAEWNSKEKEKGSHHASLKFADNSRRERGKKLNASTEPSEEITPPHV 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03220 508 MobiDBLite consensus disorder prediction 468 508 - -
Viun3g03220 508 FunFam Nitrate transporter 2.1 244 445 - -
Viun3g03220 508 FunFam High affinity nitrate transporter 2.5 36 232 - -
Viun3g03220 508 CDD MFS_NRT2_like 44 437 IPR044772 GO:0015112
Viun3g03220 508 Gene3D MFS general substrate transporter like domains 36 234 IPR036259 -
Viun3g03220 508 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 12 492 IPR044772 GO:0015112
Viun3g03220 508 MobiDBLite consensus disorder prediction 468 496 - -
Viun3g03220 508 Pfam Major Facilitator Superfamily 48 404 IPR011701 GO:0022857|GO:0055085
Viun3g03220 508 SUPERFAMILY MFS general substrate transporter 34 439 IPR036259 -
Viun3g03220 508 ProSiteProfiles Major facilitator superfamily (MFS) profile. 43 437 IPR020846 GO:0022857
Viun3g03220 508 Gene3D MFS general substrate transporter like domains 243 444 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03220 Viun-Chr3 38951763 38954381 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03220 1 500 Inorganic Solute Cotransporters AT1G12940 72.763 0.0 767
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03220 K02575 - gmx:100787888 911.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g03220 3 38951763 38954381 Viun3g03220 3 38951763 38954381 ECH