Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03149 ATGGCTTTCTTCTCCTCTTCTTCATGCTCTGATCAAACCCAGAAACAAACATCTTTCTTCATATGTATCATCTTCTTCACTTTGTTCCATAACACTGTAGAGTCAGTCTCCTTCAACTTTTCCAGCTTCCAGCAATCAAACTTGAACAACCAAATAAACTTCACGGGTGATGCCTTTCCCTCAAACGGTGTTCTTCAGCTCACGAGGAACCAACTCGATGGCCCCATCACAGATAGCGTTGGTCGAGCCTCGTATGAACAACCAGTGAGGATTTGGGATAGAAAAACAAAGAAGCTCACCGATTTCACAACCCATTTCTCTTTTGTCATGAGAGCTGTGAACCAGTCATTTGTTGGTGATGGCTTAGCCTTCTTCCTTGCACCCTTTGATTCTTCCATTCCCAACGATTCCGCTGGTGGGTTCCTCGGCCTGTTCAGCCCGGATTCCGCATTCGACACGAAGAAAAACCAGATGGTGGCAGTTGAGTTCGACAGTTTCATGAACGCATGGGATCCGAGTTCAGACCACGTAGGGATCAATGTAAACTCCATTCAATCAGTTGCAAACGTCACTTGGAAGAGCAACATTAAGAACGGGTCTGTTGCTAATGCTTGGATATGGTACAACTCCACATCCAAAACTCTCTCTGTCTTCCTTACCTATGCTCAAAATCCAACCTTCAATGGCAGTTCTAGTCTTTCTTACGTTGTTGATTTGAGGGACGTGTTGCCAGAGTTTGTTAGAATAGGCTTTTCTGCAGCAACGGGAACATGGGTTGAGATACACAACATTTTGCTTTGGTCATTCAGTTCAACCTTGGATGAGGATGGTGGGAAAAAGGTCAAGGTGGGCTTAGTGGTTGGTATAAGCGTTGGTTTGGGTTGTTTAGCTTGTGCTGCAGGTCTAATATGGTTTACCTTTTGGAGAAGGAGAAATAGACCAAGGGGTGTAAACGAGGACGGTGTTGATGCTTCCATAGACGATGAGTTTGAGAGAGGAACTGGTCCAAAGAGGTTCACCTACAGGGAACTAAGCAACGCAACCAACAACTTCGCCGAAGAAGGAAAGCTGGGACAAGGAGGGTTTGGAGGAGTTTACAAAGGTTTGATTGTGAATTCCAACCTTGAAGTGGCAGTGAAGAGGGTTTCGAAAGGGTCAAAGCAGGGGAAAAAGGAGTACATATCAGAAGTGACAGTAATCAGCCGTCTGAGACACAGAAACCTGGTTCAACTCATAGGGTGGTGCCATGAACAAGGTGAGCTTCTTCTTGTTTATGAATTCATGCCAAATGGAAGCCTTGATTCTCATCTATTTGGAAATAGAGTGATGCTTTCGTGGGGGGTGAGATACAAGGTGGCCTTAGGTTTAGCATCCGCACTTCTTTATCTTCATGAAGAGTGGGAACAGTGTGTGGTCCATAGAGATATCAAGTCAAGTAACGTAATGTTGGATGGTAATTTCAATGCAAAGCTTGGTGACTTTGGGCTTGCGAGGCTGGTAGACCATGAACTGGGTTCACAAACGACTGTTTTGGCAGGCACGATGGGGTACCTAGCCCCAGAGTGTGTGACCACAGGGAAATCAAGCAAGGAATCTGATGTGTATAGCTTTGGTGTTGTGGCACTTGAGATCACATGTGGTAGAAAACCAGTGGAGGTGAAAGAAGAGGCTGGTAAAGTTAGGCTTGTGGAGTGGGTGTGGAACCTGTATGGAAAAGGGAAAGTAGTGGAAGCAGCTGATGAGAAACTGAATTGGGAATTTGAAGAAGAGCAAATGGAATGCTTGATGGTTGTGGGGTTGTGGTGTTGTCACCCTGATCATACCATGAGACCCTCCATTAGGCAAGTGATTAGTGTGCTTAACTTTGAAGCTCCTTTGCCAAGTCTTCCATCGAAGTTGCCGGTGCCAATGTACTATGCACCTCCCATGGAGGTAACCCAATTCTCCTACACTTCATCTGCCGTCACAACCACAACCAAAGATTCCTCCCCATACTCCTCAATTTCTACTGGGTCCCGAAAGTCTCCCTTGTAG 2034 0.4572 MAFFSSSSCSDQTQKQTSFFICIIFFTLFHNTVESVSFNFSSFQQSNLNNQINFTGDAFPSNGVLQLTRNQLDGPITDSVGRASYEQPVRIWDRKTKKLTDFTTHFSFVMRAVNQSFVGDGLAFFLAPFDSSIPNDSAGGFLGLFSPDSAFDTKKNQMVAVEFDSFMNAWDPSSDHVGINVNSIQSVANVTWKSNIKNGSVANAWIWYNSTSKTLSVFLTYAQNPTFNGSSSLSYVVDLRDVLPEFVRIGFSAATGTWVEIHNILLWSFSSTLDEDGGKKVKVGLVVGISVGLGCLACAAGLIWFTFWRRRNRPRGVNEDGVDASIDDEFERGTGPKRFTYRELSNATNNFAEEGKLGQGGFGGVYKGLIVNSNLEVAVKRVSKGSKQGKKEYISEVTVISRLRHRNLVQLIGWCHEQGELLLVYEFMPNGSLDSHLFGNRVMLSWGVRYKVALGLASALLYLHEEWEQCVVHRDIKSSNVMLDGNFNAKLGDFGLARLVDHELGSQTTVLAGTMGYLAPECVTTGKSSKESDVYSFGVVALEITCGRKPVEVKEEAGKVRLVEWVWNLYGKGKVVEAADEKLNWEFEEEQMECLMVVGLWCCHPDHTMRPSIRQVISVLNFEAPLPSLPSKLPVPMYYAPPMEVTQFSYTSSAVTTTTKDSSPYSSISTGSRKSPL 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03149 677 SUPERFAMILY Protein kinase-like (PK-like) 335 650 IPR011009 -
Viun3g03149 677 ProSiteProfiles Protein kinase domain profile. 351 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g03149 677 CDD lectin_legume_LecRK_Arcelin_ConA 36 273 IPR001220 GO:0030246
Viun3g03149 677 Gene3D Transferase(Phosphotransferase) domain 1 428 641 - -
Viun3g03149 677 MobiDBLite consensus disorder prediction 656 677 - -
Viun3g03149 677 PANTHER - 51 630 - -
Viun3g03149 677 Gene3D - 33 285 - -
Viun3g03149 677 ProSitePatterns Legume lectins alpha-chain signature. 243 252 IPR000985 -
Viun3g03149 677 CDD STKc_IRAK 365 621 - -
Viun3g03149 677 SUPERFAMILY Concanavalin A-like lectins/glucanases 34 273 IPR013320 -
Viun3g03149 677 FunFam L-type lectin-domain containing receptor kinase IX.1 34 282 - -
Viun3g03149 677 Pfam Protein kinase domain 352 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g03149 677 SMART serkin_6 351 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g03149 677 ProSitePatterns Legume lectins beta-chain signature. 159 165 IPR019825 -
Viun3g03149 677 ProSitePatterns Protein kinases ATP-binding region signature. 357 380 IPR017441 GO:0005524
Viun3g03149 677 Pfam Legume lectin domain 36 275 IPR001220 GO:0030246
Viun3g03149 677 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
Viun3g03149 677 FunFam Lectin-domain containing receptor kinase A4.3 428 640 - -
Viun3g03149 677 FunFam L-type lectin-domain containing receptor kinase IX.1 336 427 - -
Viun3g03149 677 Gene3D Phosphorylase Kinase; domain 1 336 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03149 Viun-Chr3 37803538 37805802 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03149 21 639 Receptor kinase-like Gene Family AT5G10530 51.730 0.0 602
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Viun3g03149 Pkinase 6.8e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03149 - - pvu:PHAVU_003G287100g 1205.28