Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03137 ATGGAGCTTTCTCAGCTTGGTTTCTTAGATGAATTGGTGGCTCCAAGAAGAGAGACATGGAATGCTCTGTCCAGTGGGTTCTTGGAGCTATTGTCTAATGGTTGGAGTTTTGACACTTTTCTTGAGAACCCATCTTTCCCCACCTCTAACTCTCTGTTTGCTGCATTTTCAACACCCATAGACCGCAGATTTGAATGCCCTTTCACCAATGAACTACCACCATACCCTTTTCCTGATGCCTTCACAATGCCATTGCCGCACCTTCACCCTGCCAACGATGATCCCCCACCTCCACTTCCACCCACACTGGAGGATGAAGATGTTGCCTTTTATGACAACAACAACAACAACTTTGAAGAAATCAAGAGTGTCTGCAAAGTTGAGGAACAAGGTGTTGAGAATCCACAAGGCACAGAGATTCCACTCTTCAACACAGGCATGTCTGATGATGCAGAGAGGAAACAGAAGTCCAAAAAGCTAGAGGGACAGCCCTCAAAGAATCTCATGGCAGAAAGGAGGAGAAGAAAGCGTCTCAATGACCGTCTTTCCATGCTTAGGTCAATAGTCCCCAAGATCAGCAAGATGGACAGGACCTCTATTCTTGGGGATACTATAGACTACATGAAAGAGCTCTTGGAAAGGATTGGTAAGTTGCAAGAAGAAGAGGGGGAAGAGGGCTCAAGTCAGATTAATCTGTTGGGAATTTCAAAAGACCAAGTGAAACCAAATGAAGCAATTGTAAGAAACTCCCCCAAGTTTGATGTTGAAAGGAGAGACCAGGACACCAGGATCAGCATTTGCTGTGCCACAAAGCCTGGATTGCTACTATCAACCATCAATACATTAGATGCATTAGGCCTTGAGATTCAGCAATGTGTTGTAAGCAGCTTCAATGACTTTTCAGTGGAAGCATCTTGTTCTGAGGTAGGTGAACAGAGAAATTGCGTTAGCCCTGAGGAGATAAAACAATCACTATTCAGAAATGCAGGGTTTGGTGGGAAATGTCTCTAG 1011 0.4461 MELSQLGFLDELVAPRRETWNALSSGFLELLSNGWSFDTFLENPSFPTSNSLFAAFSTPIDRRFECPFTNELPPYPFPDAFTMPLPHLHPANDDPPPPLPPTLEDEDVAFYDNNNNNFEEIKSVCKVEEQGVENPQGTEIPLFNTGMSDDAERKQKSKKLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLERIGKLQEEEGEEGSSQINLLGISKDQVKPNEAIVRNSPKFDVERRDQDTRISICCATKPGLLLSTINTLDALGLEIQQCVVSSFNDFSVEASCSEVGEQRNCVSPEEIKQSLFRNAGFGGKCL 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03137 336 MobiDBLite consensus disorder prediction 136 166 - -
Viun3g03137 336 Gene3D - 170 244 IPR036638 GO:0046983
Viun3g03137 336 MobiDBLite consensus disorder prediction 149 166 - -
Viun3g03137 336 SMART finulus 168 217 IPR011598 GO:0046983
Viun3g03137 336 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 162 211 IPR011598 GO:0046983
Viun3g03137 336 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 82 331 - -
Viun3g03137 336 Pfam Helix-loop-helix DNA-binding domain 168 211 IPR011598 GO:0046983
Viun3g03137 336 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 165 224 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03137 Viun-Chr3 37719600 37721333 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03137 9 336 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 45.402 6.33e-79 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Viun3g03137 HLH 7.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03137 - - gmx:100790319 432.95