Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03104 ATGGGTTCTGGAGGCCCCGATGACGAGGACAACCGGTGGCCGCCGTGGCTGAAGCCTCTGCTGAAAGAGAGCTTCTTCGTTCAATGCAAGCTTCACGCTGATTCGCACAAGAGCGAGTGCAACATGTACTGTTTGGATTGTATGAACGGCGCACTCTGCTCCCTCTGCCTCGCTTACCACAAAGACCACCGTGCTATTCAGATAAGAAGGTCCTCGTACCATGATGTGATTAGGGTGAACGAGATTCAGAAGGTGTTGGACATTACAGGGGTCCAAACCTACATTATCAACAGCGCAAGGGTTGTTTTCTTGAACGAGAGGCCTCAGCCAAGGCCTGGTAAAGGAGTCACCAACACTTGTGAAGTCTGTGAGCGTAGCCTTCTTGATTCATACCGTTTCTGTTCTCTTGGTTGCAAGATTGTGGGGACTTCAAGGAACTTCGAGAAGAAGAAAAAGTCAGCAACAATGGCATCAGATTCAGAGGATTCATACAGCAGCAACAGCAGCCATGGAAAGCACAACAGCAACAAGGTGCAGAGTTTCACACCGTCCACGCCACCACCGACTTCGGTTAATTACAGAACGGCCAAGAGAAGAAAGGGAATACCACACCGTGCCCCCATGGGAGGACTAGTGATAGAATACTAG 648 0.5 MGSGGPDDEDNRWPPWLKPLLKESFFVQCKLHADSHKSECNMYCLDCMNGALCSLCLAYHKDHRAIQIRRSSYHDVIRVNEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSYRFCSLGCKIVGTSRNFEKKKKSATMASDSEDSYSSNSSHGKHNSNKVQSFTPSTPPPTSVNYRTAKRRKGIPHRAPMGGLVIEY 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03104 215 Pfam PLATZ transcription factor 69 140 IPR006734 -
Viun3g03104 215 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 7 208 - -
Viun3g03104 215 MobiDBLite consensus disorder prediction 149 215 - -
Viun3g03104 215 MobiDBLite consensus disorder prediction 158 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03104 Viun-Chr3 37345205 37347510 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Viun3g03104 PLATZ 5.5e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03104 - - vra:106774881 426.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g03104 3 37345205 37347510 Viun3g03104 3 37345205 37347510 ECH
Viun2g01419 2 24685975 24688384 Viun3g03104 3 37345205 37347510 PCT