Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun3g03074 | ATGGAGGGAGCAGGCAGTGGGGGCGGAGATGTGTCGACGGCGGCGCCGACACCGATTCCGAACGCTAACGCGCCGCCGCCTTTCCTGAGCAAGACGTACGACATGGTGGACGACCCTTCGACGGACTCGATTGTGTCGTGGAGTCCAACAAACAACAGCTTCATTGTTTGGAACCCTCCGGAGTTCGCCAGAGACCTTTTGCCCAAACACTTCAAGCACAATAACTTCTCCAGCTTCGTTCGCCAGTTAAACACCTACGACTTCATGGCATTCTTTGCTCTTGTTTGTAGCAACTCCTGTCCTGTTCTTCCCACCTTTGTTCTCAAGGGATTTAGAAAGGTAGACCCGGATCGCTGGGAATTTGCAAATGAGGGATTTTTAAGGGGTCAAAAGCACTTGCTTAAGACTATATCTCGGCGGAAACCTGCCCATGGTCATAATAATCAACAAGCACAACAAGTACATGGACAGAGTTCATCGGTTGGGGCTTGTGTAGAAGTTGGTAAGTTTGGACTTGAGGAAGAGGTTGAGATTCTCAAGAGAGATAAGAATGTGCTCATGCAAGAGCTTGTGAGATTGAGGCAGCAGCAGCAATCTACTGATAACCAGCTGCAGACTATGGTTCAGCGCCTTCAGGGAATGGAGCAACGACAGCAACAAATGATGTCATTCCTTGCAAAGGCTGTTCAGAGCCCTGGTTTCTTAGCTCAGTTTGTACAACAGCAAAATGATAGTAATAGACGCATAACAGAGGCGAACAAAAAACGTCGACTGAAGCAGGAAGGTATTGGTGAAATGGAACATACAGCTGCTTCTGATGGGCAAATTGTTAAATATCAACCTCTGATAAATGAAGCAGCAAAAGCAATGGTAAGGCAGATAATGAAATTGGATGCTTCTCGACTAGAATCTTTCAGTAATAACCCCGATAATTACTTGATTGGTGATCATTCATCACCATCCAGTGAAATGGACAGGGGAAACTCTTTGACTCGATCTTCTGGAGTAACACTTCAAGAGGTCCCTCCAACTAAGTTGCAGTCTTCTCATGTTCCATCTGCAACAAGGACTCAAGGGCAGGGCCATTCAACTGGAAAACCTGGGATTCTATCTTCTCCCCAAGTTGCAGCCTGTGGAGAAGTTACATATCCTAATATAAATGTTTCAGTTGGAGAACCTAATGCACCTGCTATCCCTGTTACTCACACAGATGAAATCATGCCGGACCTTTCTACAATACCAGATATAGTGGCAGGAAACATTCTCGATATTCCTCAAGAAAATTATATGGCACCAGAAACTGGTGGTGACGGATACATGGATCCTGCTTCATTTGGAGTGAATATGTCACTGCCCCTTGATTTTGATAGTATTTCACCTGAACCAGACATCGATGATTTGTTGAACTATCCTCACTTTTGGGATGATATTGTGCGAACTCCGGTATCAGAGGATTTTGAAACGAATGGTGCTGAAGTATTGAATGAGAATGAGGTGCAACCAACTGAAAATGGATGGGAAAAATCTCAAAATATGGACCTACTTACTGAACAGATGGGCTTACTTTCTTCTGATGCAAAAAAAAATTGA | 1590 | 0.4465 | MEGAGSGGGDVSTAAPTPIPNANAPPPFLSKTYDMVDDPSTDSIVSWSPTNNSFIVWNPPEFARDLLPKHFKHNNFSSFVRQLNTYDFMAFFALVCSNSCPVLPTFVLKGFRKVDPDRWEFANEGFLRGQKHLLKTISRRKPAHGHNNQQAQQVHGQSSSVGACVEVGKFGLEEEVEILKRDKNVLMQELVRLRQQQQSTDNQLQTMVQRLQGMEQRQQQMMSFLAKAVQSPGFLAQFVQQQNDSNRRITEANKKRRLKQEGIGEMEHTAASDGQIVKYQPLINEAAKAMVRQIMKLDASRLESFSNNPDNYLIGDHSSPSSEMDRGNSLTRSSGVTLQEVPPTKLQSSHVPSATRTQGQGHSTGKPGILSSPQVAACGEVTYPNINVSVGEPNAPAIPVTHTDEIMPDLSTIPDIVAGNILDIPQENYMAPETGGDGYMDPASFGVNMSLPLDFDSISPEPDIDDLLNYPHFWDDIVRTPVSEDFETNGAEVLNENEVQPTENGWEKSQNMDLLTEQMGLLSSDAKKN | 529 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun3g03074 | 529 | MobiDBLite | consensus disorder prediction | 305 | 372 | - | - | |
Viun3g03074 | 529 | Coils | Coil | 169 | 196 | - | - | |
Viun3g03074 | 529 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Viun3g03074 | 529 | FunFam | Heat shock transcription factor 1 | 21 | 141 | - | - | |
Viun3g03074 | 529 | PANTHER | HEAT SHOCK TRANSCRIPTION FACTOR | 22 | 328 | IPR027725 | - | |
Viun3g03074 | 529 | MobiDBLite | consensus disorder prediction | 248 | 266 | - | - | |
Viun3g03074 | 529 | PRINTS | Heat shock factor (HSF) domain signature | 28 | 51 | IPR000232 | GO:0003700|GO:0006355|GO:0043565 | |
Viun3g03074 | 529 | PRINTS | Heat shock factor (HSF) domain signature | 79 | 91 | IPR000232 | GO:0003700|GO:0006355|GO:0043565 | |
Viun3g03074 | 529 | PRINTS | Heat shock factor (HSF) domain signature | 66 | 78 | IPR000232 | GO:0003700|GO:0006355|GO:0043565 | |
Viun3g03074 | 529 | Pfam | HSF-type DNA-binding | 28 | 140 | IPR000232 | GO:0003700|GO:0006355|GO:0043565 | |
Viun3g03074 | 529 | MobiDBLite | consensus disorder prediction | 246 | 269 | - | - | |
Viun3g03074 | 529 | MobiDBLite | consensus disorder prediction | 305 | 370 | - | - | |
Viun3g03074 | 529 | Gene3D | - | 21 | 141 | IPR036388 | - | |
Viun3g03074 | 529 | SMART | hsfneu3 | 24 | 140 | IPR000232 | GO:0003700|GO:0006355|GO:0043565 | |
Viun3g03074 | 529 | SUPERFAMILY | "Winged helix" DNA-binding domain | 23 | 140 | IPR036390 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun3g03074 | Viun-Chr3 | 37074880 | 37080242 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun3g03074 | 7 | 523 | HSF | AT1G32330 | 50.564 | 2.68e-158 | 458 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | HSF | Viun3g03074 | HSF_DNA-bind | 3e-30 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun3g03074 | K09419 | - | gmx:732544 | 815.839 |