Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03074 ATGGAGGGAGCAGGCAGTGGGGGCGGAGATGTGTCGACGGCGGCGCCGACACCGATTCCGAACGCTAACGCGCCGCCGCCTTTCCTGAGCAAGACGTACGACATGGTGGACGACCCTTCGACGGACTCGATTGTGTCGTGGAGTCCAACAAACAACAGCTTCATTGTTTGGAACCCTCCGGAGTTCGCCAGAGACCTTTTGCCCAAACACTTCAAGCACAATAACTTCTCCAGCTTCGTTCGCCAGTTAAACACCTACGACTTCATGGCATTCTTTGCTCTTGTTTGTAGCAACTCCTGTCCTGTTCTTCCCACCTTTGTTCTCAAGGGATTTAGAAAGGTAGACCCGGATCGCTGGGAATTTGCAAATGAGGGATTTTTAAGGGGTCAAAAGCACTTGCTTAAGACTATATCTCGGCGGAAACCTGCCCATGGTCATAATAATCAACAAGCACAACAAGTACATGGACAGAGTTCATCGGTTGGGGCTTGTGTAGAAGTTGGTAAGTTTGGACTTGAGGAAGAGGTTGAGATTCTCAAGAGAGATAAGAATGTGCTCATGCAAGAGCTTGTGAGATTGAGGCAGCAGCAGCAATCTACTGATAACCAGCTGCAGACTATGGTTCAGCGCCTTCAGGGAATGGAGCAACGACAGCAACAAATGATGTCATTCCTTGCAAAGGCTGTTCAGAGCCCTGGTTTCTTAGCTCAGTTTGTACAACAGCAAAATGATAGTAATAGACGCATAACAGAGGCGAACAAAAAACGTCGACTGAAGCAGGAAGGTATTGGTGAAATGGAACATACAGCTGCTTCTGATGGGCAAATTGTTAAATATCAACCTCTGATAAATGAAGCAGCAAAAGCAATGGTAAGGCAGATAATGAAATTGGATGCTTCTCGACTAGAATCTTTCAGTAATAACCCCGATAATTACTTGATTGGTGATCATTCATCACCATCCAGTGAAATGGACAGGGGAAACTCTTTGACTCGATCTTCTGGAGTAACACTTCAAGAGGTCCCTCCAACTAAGTTGCAGTCTTCTCATGTTCCATCTGCAACAAGGACTCAAGGGCAGGGCCATTCAACTGGAAAACCTGGGATTCTATCTTCTCCCCAAGTTGCAGCCTGTGGAGAAGTTACATATCCTAATATAAATGTTTCAGTTGGAGAACCTAATGCACCTGCTATCCCTGTTACTCACACAGATGAAATCATGCCGGACCTTTCTACAATACCAGATATAGTGGCAGGAAACATTCTCGATATTCCTCAAGAAAATTATATGGCACCAGAAACTGGTGGTGACGGATACATGGATCCTGCTTCATTTGGAGTGAATATGTCACTGCCCCTTGATTTTGATAGTATTTCACCTGAACCAGACATCGATGATTTGTTGAACTATCCTCACTTTTGGGATGATATTGTGCGAACTCCGGTATCAGAGGATTTTGAAACGAATGGTGCTGAAGTATTGAATGAGAATGAGGTGCAACCAACTGAAAATGGATGGGAAAAATCTCAAAATATGGACCTACTTACTGAACAGATGGGCTTACTTTCTTCTGATGCAAAAAAAAATTGA 1590 0.4465 MEGAGSGGGDVSTAAPTPIPNANAPPPFLSKTYDMVDDPSTDSIVSWSPTNNSFIVWNPPEFARDLLPKHFKHNNFSSFVRQLNTYDFMAFFALVCSNSCPVLPTFVLKGFRKVDPDRWEFANEGFLRGQKHLLKTISRRKPAHGHNNQQAQQVHGQSSSVGACVEVGKFGLEEEVEILKRDKNVLMQELVRLRQQQQSTDNQLQTMVQRLQGMEQRQQQMMSFLAKAVQSPGFLAQFVQQQNDSNRRITEANKKRRLKQEGIGEMEHTAASDGQIVKYQPLINEAAKAMVRQIMKLDASRLESFSNNPDNYLIGDHSSPSSEMDRGNSLTRSSGVTLQEVPPTKLQSSHVPSATRTQGQGHSTGKPGILSSPQVAACGEVTYPNINVSVGEPNAPAIPVTHTDEIMPDLSTIPDIVAGNILDIPQENYMAPETGGDGYMDPASFGVNMSLPLDFDSISPEPDIDDLLNYPHFWDDIVRTPVSEDFETNGAEVLNENEVQPTENGWEKSQNMDLLTEQMGLLSSDAKKN 529
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03074 529 MobiDBLite consensus disorder prediction 305 372 - -
Viun3g03074 529 Coils Coil 169 196 - -
Viun3g03074 529 MobiDBLite consensus disorder prediction 1 22 - -
Viun3g03074 529 FunFam Heat shock transcription factor 1 21 141 - -
Viun3g03074 529 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 22 328 IPR027725 -
Viun3g03074 529 MobiDBLite consensus disorder prediction 248 266 - -
Viun3g03074 529 PRINTS Heat shock factor (HSF) domain signature 28 51 IPR000232 GO:0003700|GO:0006355|GO:0043565
Viun3g03074 529 PRINTS Heat shock factor (HSF) domain signature 79 91 IPR000232 GO:0003700|GO:0006355|GO:0043565
Viun3g03074 529 PRINTS Heat shock factor (HSF) domain signature 66 78 IPR000232 GO:0003700|GO:0006355|GO:0043565
Viun3g03074 529 Pfam HSF-type DNA-binding 28 140 IPR000232 GO:0003700|GO:0006355|GO:0043565
Viun3g03074 529 MobiDBLite consensus disorder prediction 246 269 - -
Viun3g03074 529 MobiDBLite consensus disorder prediction 305 370 - -
Viun3g03074 529 Gene3D - 21 141 IPR036388 -
Viun3g03074 529 SMART hsfneu3 24 140 IPR000232 GO:0003700|GO:0006355|GO:0043565
Viun3g03074 529 SUPERFAMILY "Winged helix" DNA-binding domain 23 140 IPR036390 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Viun3g03074 Viun-Chr3 37074880 37080242 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03074 7 523 HSF AT1G32330 50.564 2.68e-158 458
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Viun3g03074 HSF_DNA-bind 3e-30 CL0123
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03074 K09419 - gmx:732544 815.839