Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03062 ATGGAACTATTTCCAGCACAACCAGATTTGTCCTTGCAAATCACTTCTCCAAACACCAAACCCACATCCAGTAATTGGAAGAAGAGAAGCACAGAAAAGGAGGAGATGGATTTGGGATTTTGGAAGAGAGCTTTGGAATCCAAAACAGTGAGAACAGACCTCTCCCTCTCCAATCCAACAAGGGCTTCTTTTTCTTCTTCTTCTTCTTCTTCAAACACCAACAACACCCCTAACCCCAACCACTTCCAAAACAACACTATCCAACAAAACCACTTCTTTCAGCAGCAGCAAGACCTACGCTTTCTCACACCCATAAGAGGAATCCCACTGTACCAAAACCCTCCTTTCTCATACACACCCACTTCTTCAACCCCTTTCCTCAACTCAACCTTCCTCTCATCACGCTTCCCTCCCAAGCGTAACATCAGGGCTCCTCGGATGCGTTGGACCACTGCACTCCATGCTCGCTTCGTCCATGTCGTTCAACTCTTGGGCGGCCATGAAAGGGCTACACCCAAATCAGTTCTTGAGCTAATGGATGTAAAGGATCTCACTTTAGCACATGTTAAATCTCACTTGCAGATGTACCGAACAGTGAAAACTACTGATAGAGCTGCGGCATCATCGGGGCAATCTGATACTTATGATAATGGGTCTTCTGGAGATACTTCTGAAGACTTGGTGTTTGATAGAAACTCTCCAAGGAGGTCTGATCTATCTATTAGGCAGGCAAGACCAAGTGTTAATCAAGATTATGGAAATGGTGGTCTTTGGAACAACTCTTCAAGCAGAGAAGCCTTGTTGCATGCCAAGCCAAAGCTTGACTCCATTGGGAACGTGCCTTCTGTTGAGGGAATGGATCCAAAGGGACAAAGCAATGAAATATCAGATGGAAACTCTTCCTCAGACACTGCAGAATCAAGTGGCAAGAAGCCAAATTTGGATTTGGAATTCACGTTAGGTCGATCAGTTTGA 975 0.4513 MELFPAQPDLSLQITSPNTKPTSSNWKKRSTEKEEMDLGFWKRALESKTVRTDLSLSNPTRASFSSSSSSSNTNNTPNPNHFQNNTIQQNHFFQQQQDLRFLTPIRGIPLYQNPPFSYTPTSSTPFLNSTFLSSRFPPKRNIRAPRMRWTTALHARFVHVVQLLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASSGQSDTYDNGSSGDTSEDLVFDRNSPRRSDLSIRQARPSVNQDYGNGGLWNNSSSREALLHAKPKLDSIGNVPSVEGMDPKGQSNEISDGNSSSDTAESSGKKPNLDLEFTLGRSV 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03062 324 MobiDBLite consensus disorder prediction 203 257 - -
Viun3g03062 324 MobiDBLite consensus disorder prediction 203 227 - -
Viun3g03062 324 MobiDBLite consensus disorder prediction 9 25 - -
Viun3g03062 324 MobiDBLite consensus disorder prediction 52 84 - -
Viun3g03062 324 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 8 323 IPR044847 GO:0000976|GO:0006355|GO:0010158
Viun3g03062 324 Pfam Myb-like DNA-binding domain 146 197 IPR001005 -
Viun3g03062 324 NCBIfam myb-like DNA-binding domain, SHAQKYF class 145 198 IPR006447 GO:0003677
Viun3g03062 324 MobiDBLite consensus disorder prediction 239 257 - -
Viun3g03062 324 MobiDBLite consensus disorder prediction 1 31 - -
Viun3g03062 324 MobiDBLite consensus disorder prediction 271 324 - -
Viun3g03062 324 SUPERFAMILY Homeodomain-like 142 198 IPR009057 -
Viun3g03062 324 MobiDBLite consensus disorder prediction 292 309 - -
Viun3g03062 324 Gene3D - 144 201 - -
Viun3g03062 324 FunFam Myb family transcription factor 143 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03062 Viun-Chr3 37004798 37009713 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03062 1 321 G2-like Transcription Factor Family AT4G17695 39.178 3.36e-55 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Viun3g03062 Myb_DNA-binding 2.3e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03062 - - pvu:PHAVU_003G283000g 426.402