Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03053 ATGGCTCGCTCTGTGCCTTTGGTCTCAACCATCTTTGTGTTTCTTCTGCTACTGGTGGCCACTGAGATGGGGCCAACAATGGTGGCAGAGGCAAGGACCTGTGAGTCTCAGAGCCACCGTTTCAAGGGACCATGTGTGAGTGACACCAACTGTGCTTCTGTTTGCCGAACTGAACGTTTCAGCGGAGGACATTGCCGTGGCTTCCGTCGCAGATGCTTCTGCACCAAACATTGCTAA 237 0.5316 MARSVPLVSTIFVFLLLLVATEMGPTMVAEARTCESQSHRFKGPCVSDTNCASVCRTERFSGGHCRGFRRRCFCTKHC 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03053 78 Gene3D - 32 78 IPR036574 -
Viun3g03053 78 ProSitePatterns Gamma-thionins family signature. 32 55 IPR008176 GO:0006952
Viun3g03053 78 PRINTS Purothionin signature 63 77 IPR008176 GO:0006952
Viun3g03053 78 PRINTS Purothionin signature 33 48 IPR008176 GO:0006952
Viun3g03053 78 CDD Knot1 43 75 IPR003614 GO:0006952
Viun3g03053 78 SUPERFAMILY Scorpion toxin-like 32 78 IPR036574 -
Viun3g03053 78 PANTHER DEFENSIN-LIKE PROTEIN 1 8 78 - -
Viun3g03053 78 SMART gth_4 33 78 IPR003614 GO:0006952
Viun3g03053 78 Pfam Gamma-thionin family 32 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03053 Viun-Chr3 36886602 36887355 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03053 1 78 Plant Defensins Gene Families AT2G02100 64.103 3.26e-32 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03053 - - gmx:547843 150.984