Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03043 ATGAGTGGTGGCAGGAAGAAGAAGCTGCGTTTAAGCAAGATCTACTCATTCGCCTGCTGCAAGGCATCTTTCAAGGGAGATGATTTACAGATTGGAGGAAAAGGTTATTCCAGGGTGGTGTTCTGCAATGAGCCAGATATCTTTGAGGATGGTGTTAAGAATTTTGCAGATAATTCTGTCAGATCTACAAAATATACTCTTGCAACTTTCTTTCCCAAATCTTTGTTTGAGCAGTTTAGGAGGGTGGCAAACTTCTATTTTTTGGTCACTGGCACCTTGGCCTTCACAAAACTTGCTCCATATACTGCTGTCAGTGCTATCCTTCCACTGATTATTGTTATTGGGGCTACTATGGTGAAAGAAGGTATCGAAGACTGGCGCAGGAAAACACAGGATATAGAGGTGAACAATAGAAGAGTTAAAGTTCATAAAGTTGGTGGTATTTTTGAATATACTGCATGGAAGAATCTGAGGGTGGGGAATATAGTGAAGGTAGAGAAGGATGAGTTCTTCCCAGCTGACCTGCTGTTACTTTCATCCAGTTACGAGGATGCTGTTTGCTATGTTGAGACCATGAACTTAGATGGGGAGACAAATTTAAAGTTAAAACAAGGGTTAGAGGTAACATCTTCTTTACAGGAGGATCTTAACATCCAAAAATTTAAAGCTACAGTGAAATGTGAAGACCCCAATGCAAATCTGTATTCATTTGTTGGAAGCATGGAGTTTGAAGGGAAAAATTATGCTCTCTCTCCTCAGCAACTTCTTCTCCGTGACTCTAAACTTCGTAATACAGACTACATTTTTGGAGCTGTCATTTTCACTGGTCATGACACTAAGGTTATTCAAAATTCTACGGACCCACCTTCAAAAAGAAGCAGAATAGAGAAGAAGATGGACAAAGTGATCTATTTCTTGTTTTGTATTTTGTTTCTAATGGCATTTGTTGGATCTTTTTTCTTTGGCATTGCAACTAAAGATGACTTCCAAAATGGGTTGATGAAAAGATGGTACTTAAGACCAGACGATTCTACTGTTTTCTTTGACCCAAAAAGACCAGCTGCTGCTGCTTTATTTCATTGTTTGACAGCCTTAATGTTGTATGGGTTCTTTATTCCCATCTCCTTGTATGTGTCAATAGAAATGGTCAAAGTTCTTCAGAGTGTTTTCATCAATCAAGATATTCATATGTACTACAAGGAAGCAGACAAACCAGCCCGAGCTCGTACTTCAAACTTGAATGAAGAGCTTGGGCAGGTTGATACAATACTTTCTGACAAGACTGGAACTCTGACCTGCAACTCAATGGAGTTCATCAAATGTTCTATTGCCGGGGTAGCATATGGCTGTGGTGCTACAGAGGTTGAGAAGGTCATGGGTCGAAGAAAAGGTTCACCACCAATTCGTGAGCATGATATTGAATCTGAAGCACATAACATTAGGGGTTCGCTAGATAAAAAAACACTTATCAAAGGTTTTAACTTTGATGACGAAAGAATAAGAGATGGACATTGGGTTAATGAGCCTCATGCAGATGTTATCCAGAAGTTTTTTCGAGTGTTGGCAGTCTGTCATACGGCCATACCAGAAGTGAATGAAGACACCGGGAATGTTTCATATGAGGCTGAATCCCCAGATGAAGCCGCATTTCTGATTGCAGCAAGAGAACTTGGTTTTGAATTCTACAGAAGGGGTCAGACTAGTTTATCGACATTTGAGTTGGATCCAGTTTCTGGCAATAAAGTTGAAAGGAAATACAAGCTTCTCAATGTTTTAGAATTCAATAGCTCAAGGAAGCGAATGTCAGTGATAGTGGAAGATGAAGCAGGGAAAATTTTGCTTCTCTGCAAAGGCGCAGACAGCATAATGTTTGAAAGACTTGCCAAGAATGGGAGGGAGTTTGAAGAGAAAACCATGGAGCATGTGCATGAATATGCTGATGCAGGTCTGAGAACCCTTATACTGGCCTATCGTGAGCTTGGTGCGGAAGAATACAAGGAATTTAATAATAAATTCTCCAAGGCCAAGAATTTAGTCAGTGCTGATCAGGAGAGACTGATTGAGGAAGTAGCAGATAAGATTGAGAAGAACCTGATCCTTCTTGGTGCCACTGCTGTGGAGGACAAGCTCCAAGATGGGGTTCCTGATTGCATTGACAAGCTTGCACAAGCAGGAATTAAAATTTGGGTTTTGACTGGGGATAAAATGGAGACTGCAATCAACATTGGTTTTGCTTGCAGTTTGCTTAGACAAGGGATGAAGCAGATTATAATTCATTTGGATAGTCCAGAAATTCAAGCACTAGAGAAAGATGGGGACAAGATGGCCATTACCAAGGCATCAAGGCAAAGTGTGCTCTTTCAGATATCTGAAGGTGCTGCACAACTCGGTGCTTACAGAGGGAGCTCTCAGAAGGCATTTGCTCTGGTTATTGATGGAAAATCACTTGTTTATGCACTAGAAGACAATATAAAGCACATGTTTCTGGAACTAGCGATGCATTGTGCATCTGTTATTTGTTGTCGCTCATCCCCAAAGCAGAAGGCACTGGTCACTAGATTGGTCAAATCTGGAACTGGGAAAACAACCTTAGCCATTGGGGATGGAGCTAACGATGTGGGAATGCTTCAAGAAGCAGATATAGGGGTTGGTATAAGTGGTGTTGAAGGAATGCAGGCAGTTATGTCTAGTGATATTGCAATTGCACAATTCCGGTATTTGGAACGGTTACTTCTGGTTCACGGACATTGGTGTTACAGAAGGATCTCGTCTATGATATGCTACTTTTTCTACAAGAATATCACATTTGGTTTCACTCTATTCTTGTATGAAGTGTATGCATCATTCTCTGGACAACCAGCATACAATGACTGGTTTTTGTCTCTCTATAATGTCTTCTTTTCTTCACTTCCTGTGGTTGCACTTGGGGTGTTTGACCAGGATGTATCCGCTCGGTACTGCCTGAAGTTTCCTTTGTTATATCAAGAAGGAGTGCAGAATGTTCTGTTCAGCTGGCGTAGAATACTCAGCTGGATGCTTAATGGATTTATCAGTGCCTTAATAATTTTCTTCTTCTGCACAAAAGCGATGGAGCTCCAGGCCTTCGATGCAGAGGGGAGAACTGCTGGAAAGGATATACTGGGAGTAACAATGTACACCTGTGTAGTTTGGGTTGTAAACTTGCAAATGGCACTGGCCATAAGTTACTTCACCATGATCCAACATTTTTTCATCTGGGGTTCCATTCTTTACTGGTATATTTTTCTCATGGTATATGGAGCAATGCCCCCACACTTTACAACAAATGCTTACAAAGTCTTCGTTGAAGCTCTTGCTCCTTCCCCTTCCTATTGGCTTGTGACATTCTTTGTGGTGATCTCAACCCTTATACCATACTTCTCTTATGCCGCAATTCAGATGCGGTTCTTTCCCATGTACCATGAACTAGTACAATGGATAAGGCATGAAGGGAAGATTAAGGATCCTGAGTTTTGTGATATGGTGCGGCAGAGATCATTGCGGCCAACAACCGTGGGTTCAACAGCACGCTTAGCTGCTAAGACTCACCACGTAAGAGACAGAAATGTTAAACGGTAG 3597 0.4137 MSGGRKKKLRLSKIYSFACCKASFKGDDLQIGGKGYSRVVFCNEPDIFEDGVKNFADNSVRSTKYTLATFFPKSLFEQFRRVANFYFLVTGTLAFTKLAPYTAVSAILPLIIVIGATMVKEGIEDWRRKTQDIEVNNRRVKVHKVGGIFEYTAWKNLRVGNIVKVEKDEFFPADLLLLSSSYEDAVCYVETMNLDGETNLKLKQGLEVTSSLQEDLNIQKFKATVKCEDPNANLYSFVGSMEFEGKNYALSPQQLLLRDSKLRNTDYIFGAVIFTGHDTKVIQNSTDPPSKRSRIEKKMDKVIYFLFCILFLMAFVGSFFFGIATKDDFQNGLMKRWYLRPDDSTVFFDPKRPAAAALFHCLTALMLYGFFIPISLYVSIEMVKVLQSVFINQDIHMYYKEADKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGCGATEVEKVMGRRKGSPPIREHDIESEAHNIRGSLDKKTLIKGFNFDDERIRDGHWVNEPHADVIQKFFRVLAVCHTAIPEVNEDTGNVSYEAESPDEAAFLIAARELGFEFYRRGQTSLSTFELDPVSGNKVERKYKLLNVLEFNSSRKRMSVIVEDEAGKILLLCKGADSIMFERLAKNGREFEEKTMEHVHEYADAGLRTLILAYRELGAEEYKEFNNKFSKAKNLVSADQERLIEEVADKIEKNLILLGATAVEDKLQDGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMKQIIIHLDSPEIQALEKDGDKMAITKASRQSVLFQISEGAAQLGAYRGSSQKAFALVIDGKSLVYALEDNIKHMFLELAMHCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNITFGFTLFLYEVYASFSGQPAYNDWFLSLYNVFFSSLPVVALGVFDQDVSARYCLKFPLLYQEGVQNVLFSWRRILSWMLNGFISALIIFFFCTKAMELQAFDAEGRTAGKDILGVTMYTCVVWVVNLQMALAISYFTMIQHFFIWGSILYWYIFLMVYGAMPPHFTTNAYKVFVEALAPSPSYWLVTFFVVISTLIPYFSYAAIQMRFFPMYHELVQWIRHEGKIKDPEFCDMVRQRSLRPTTVGSTARLAAKTHHVRDRNVKR 1198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03043 1198 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Viun3g03043 1198 PRINTS P-type cation-transporting ATPase superfamily signature 866 885 - -
Viun3g03043 1198 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 39 1155 - -
Viun3g03043 1198 Gene3D - 566 701 IPR023299 GO:0000166
Viun3g03043 1198 FunFam Phospholipid-transporting ATPase 701 906 - -
Viun3g03043 1198 Gene3D - 114 287 - -
Viun3g03043 1198 SFLD p-type atpase 408 917 IPR044492 -
Viun3g03043 1198 CDD P-type_ATPase_APLT_Dnf-like 57 1026 - -
Viun3g03043 1198 Pfam Phospholipid-translocating ATPase N-terminal 41 106 IPR032631 -
Viun3g03043 1198 FunFam Phospholipid-transporting ATPase 543 701 - -
Viun3g03043 1198 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Viun3g03043 1198 SUPERFAMILY Calcium ATPase, transmembrane domain M 53 1144 IPR023298 -
Viun3g03043 1198 SUPERFAMILY HAD-like 419 921 IPR036412 -
Viun3g03043 1198 FunFam Phospholipid-transporting ATPase 116 286 - -
Viun3g03043 1198 SFLD Haloacid Dehalogenase 408 917 - -
Viun3g03043 1198 NCBIfam HAD-IC family P-type ATPase 838 948 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Viun3g03043 1198 Pfam Cation transport ATPase (P-type) 523 627 - -
Viun3g03043 1198 Gene3D - 702 906 IPR023214 -
Viun3g03043 1198 Pfam Phospholipid-translocating P-type ATPase C-terminal 894 1144 IPR032630 -
Viun3g03043 1198 NCBIfam phospholipid-translocating P-type ATPase 55 1151 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Viun3g03043 1198 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 500 703 IPR023299 GO:0000166
Viun3g03043 1198 SUPERFAMILY Calcium ATPase, transduction domain A 142 283 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03043 Viun-Chr3 36808435 36817023 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03043 1 1192 Primary Pumps ATPases AT1G68710 73.714 0.0 1890
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03043 K01530 - gmx:100781421 2180.99