Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03019 ATGGAGTCTGAGGAGAACGAACGTGAGAAGGGTCGCGAGGTTTGCGCGAATGGAAATAGCATCAGTGCGGAAGAACTTGAGGCCAAACTTGATGCAGGAAATGTTCAAGAAGCAGAAGCAGCACTGCGTGATGGGTTGTCACTAAGTTCCGAGGAAGCAAAGGCTGTTCTTGGAAAATTAGAGTATCAAAGAGGTAACGTGGAAAATGCTTTTCAAGTGATTGATGGAATTGATCTTCAACCAATCATACAACAATTACAAAGTTCCCTTTCGGAAAAAGGACCTGTGAAGAATGCTTTGTTGTTTGAAGCCGTCTACCTAAGAATCAAGTGTCTACAAAAGTTGGATAAATGTACCGAAGCTATTGATGAGTGCAAGAGTGTTCTTGAGGGTGTTGAGAAGACATATGGTCAGGGTACATTTGATACACAAGCCGACAATAAATCACAGGAGATAGCCGGTCGTCTAGTGGAGCTCCTTCCAGAGCTTTGGAAACAGGTTGGTCGCTATGATGAGGCATTGTCTGCTTATAGGAATGCCCTACTTAGCCAATGGAACCTTGACAATGAAATTTGTGCAAGAATTCAGAAGGCACTTGCTGTGTTTTTGTTGTACAGCGAAGTGGAGGCAAGTCCACCTAACAAGACCGATGGATCTTATGTACCCAAAAGCAATCTGGAAGAGGCAGTTCTTCTTTTAATGATTATTTTGAGAAACTTCATCCTTGGTAAGATAAAGTGGGATCCTGCAGTTATGGAACACCTGACTTTCACACTTTCAACATGTGGACAAACCTCTATTTTAACAAAGCAATTTGAAGAGTTGATACCTGGTGTATATCATCGCATTGATCGTTGGACTTTTATAGCTTTGTGTAATTGTGGAGCTGGAGAAAATAAAAGTGCTTTGAATCTGCTTAGGATGTCTTTGCATAAGCATGAACGACCAAATGACCTAATAGCACTATTATTGGCTGCCAAAATTTGTAGTGAGGATCCTCATCTTGGTGCTGAGGGAGTAGGTTATGCACAAAGAGCAATCAATAATGCTCGAGGATTAGATGAGCATTTGAAAGGTGTGGGTCTTAGGATGTTGGGACTTTGCCTAGGAAAACAGGCTAGGGTCTGTTCTTCTGACCATGAGAGGTCTAACCTTCAATCCAAAGCTCTACAATCATTAGAGAAGGCAGTTAGATTGGAGCAAAACAATTCTGATCTCATTTTTGAATTGGCTATTCAATATGCTATGCATCGAAATTTAACTGTTGCTTTATCATGTGCTAAACAATTCTTTGACAAAACTGGTGGCTCTACATTGAAAGGTTGGAGATTGCTTGCTCTAGTTTTGTCTGCACAAAAAAGATTTGCAGAGGCCGAAGTGGTCACTGATGCAGCTGTAGACGAGACTGCAAAATGGGAGCAAGGGCCATTACTCAGACTGAAAGCCAAGTTGAAGATCTCCCAATTAAAACCCATGGATGCTATTGAAATTTATCGGTACCTTCTTGCATTGGTTCAAGCCCAGAAGAAATCACCTGGGCCATCTACACAAGGTTCACAGGTTGAGGATGGTAAGATAAACGAACTTGAGGTTTGGCATGGTCTGGCAAATTTGTATGCAAGCCTTTCTCATTGGAAGGATGCCGAAATCTGTTTGCAAAAGGCAAAAGAGTTAAAGGAATTCTCACCAGCAACAACGCATGCTGAAGCTATTATGTTCGAAGGTCGTGGAGAACATTTAGAAGCTCTCATTGCTACTTTGAATGCGGTTCTGCTTGAACCAAACTATGTGCCAAGCAAGATCTTGATGGCTTCTTTGATACTGAAAATCAACTTTATTTCTGCTGCGCCTGTTGCTAGATGCCTACTTTGTGATGCACTTAGAATAGAACCCACCAACCGCATGGCTTGGTATTACTTGGGATTAACTCACAAAGCTGATGGTCGAATAACTGATGCTGCTGATTGCTTCCAAGCAGCTTCCTTGCTTGAAGAATCTGATCCCATTGAAACTTTCAGCTCTATGATTTGA 2031 0.418 MESEENEREKGREVCANGNSISAEELEAKLDAGNVQEAEAALRDGLSLSSEEAKAVLGKLEYQRGNVENAFQVIDGIDLQPIIQQLQSSLSEKGPVKNALLFEAVYLRIKCLQKLDKCTEAIDECKSVLEGVEKTYGQGTFDTQADNKSQEIAGRLVELLPELWKQVGRYDEALSAYRNALLSQWNLDNEICARIQKALAVFLLYSEVEASPPNKTDGSYVPKSNLEEAVLLLMIILRNFILGKIKWDPAVMEHLTFTLSTCGQTSILTKQFEELIPGVYHRIDRWTFIALCNCGAGENKSALNLLRMSLHKHERPNDLIALLLAAKICSEDPHLGAEGVGYAQRAINNARGLDEHLKGVGLRMLGLCLGKQARVCSSDHERSNLQSKALQSLEKAVRLEQNNSDLIFELAIQYAMHRNLTVALSCAKQFFDKTGGSTLKGWRLLALVLSAQKRFAEAEVVTDAAVDETAKWEQGPLLRLKAKLKISQLKPMDAIEIYRYLLALVQAQKKSPGPSTQGSQVEDGKINELEVWHGLANLYASLSHWKDAEICLQKAKELKEFSPATTHAEAIMFEGRGEHLEALIATLNAVLLEPNYVPSKILMASLILKINFISAAPVARCLLCDALRIEPTNRMAWYYLGLTHKADGRITDAADCFQAASLLEESDPIETFSSMI 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03019 676 PANTHER PROTEIN NPG1 5 673 IPR043376 -
Viun3g03019 676 SUPERFAMILY TPR-like 164 459 IPR011990 GO:0005515
Viun3g03019 676 Gene3D Tetratricopeptide repeat domain 25 233 IPR011990 GO:0005515
Viun3g03019 676 Gene3D Tetratricopeptide repeat domain 510 671 IPR011990 GO:0005515
Viun3g03019 676 Gene3D Tetratricopeptide repeat domain 271 509 IPR011990 GO:0005515
Viun3g03019 676 SMART tpr_5 634 667 IPR019734 GO:0005515
Viun3g03019 676 SMART tpr_5 563 596 IPR019734 GO:0005515
Viun3g03019 676 SMART tpr_5 439 472 IPR019734 GO:0005515
Viun3g03019 676 SMART tpr_5 529 562 IPR019734 GO:0005515
Viun3g03019 676 SMART tpr_5 102 135 IPR019734 GO:0005515
Viun3g03019 676 SMART tpr_5 283 316 IPR019734 GO:0005515
Viun3g03019 676 SUPERFAMILY TPR-like 526 660 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03019 Viun-Chr3 36569335 36573634 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03019 3 676 Calmodulin-binding Proteins AT2G43040 62.302 0.0 839
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03019 K21843 - gmx:100811897 1026.54