Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03007 ATGGTTTTGGATGACGCAGTTTTGTTTTGTTCTGTTCTGATTTGGACCCTTTTGATGTTGGTGATAAAGGATATGGCACTGAAGTTTTCAGGTGCTTACAAACAATGCAAACCCTGCACAGGGTCCAGTAACTACAAGAAAGGACATAGACCATATCCAGACTTCGATACCATCTCAGAAGGGGTTCCATACCCTTACATTGGGGGTGCAAGCTCAAGTTCAACCCCTGCTTGGGACTTCACAACCTCTCACTACCCTGGTGGTAGATCAGACCCACGATTTACTGGGGCATTTGGTGGTGACCGCACGCCTAGAGGACGAGACTCAGCATCAGTTTGTGATGTAGTCTTAGAGGACGAGGATGAGCCTAAGGAGTGGATGGCAGTGGTGGAACCAGGGGTTCACATTACCTTTGTGTCTCTTCCTAATGGGGGAAATGATCTTAAAAGAATTCGCTTCAGCCGAGAGATGTTTAATAAATGGCAAGCGCAAAGATGGTGGGGTGAGAATTACGACAGAATCATGGAACTTTATAACGTGCAGAGATTTAATCGACAGGCACTCAACACTCCTCCAAGGTCTGAGGACGAGCCAAGAGATTCTACCTACACAAGATTGACATCTGCACAGGAAAGTCCCATGGCCTCAAACAAGGATTGGACCCCCAGGAGTCACTATAAACCTTCTGGGAGCAGAGGATATTACCCCTCTGAACCGTTGGATCATGGTGGAGGTGGTGGGCACTTCCATGCAGGGCCATCTATGGAACCAGCGAGGGATACTACTGCTTCTAGAGATGAGCCTTCTATCAGCAATGCCAGCGAAATGGAGGCAGAATGGGTAGAACAAGACGAGCCTGGGGTTTACATTACAATCCGGCAGTTAGCTGATGGGACTAGGGAGCTTCGACGTGTCAGATTCAGCCGGGAAAGATTTGGTGAGGTGAATGCAAAAACATGGTGGGAAGAAAACAGAGAGAGAATACAAGCTCAATACCTTTGA 1002 0.477 MVLDDAVLFCSVLIWTLLMLVIKDMALKFSGAYKQCKPCTGSSNYKKGHRPYPDFDTISEGVPYPYIGGASSSSTPAWDFTTSHYPGGRSDPRFTGAFGGDRTPRGRDSASVCDVVLEDEDEPKEWMAVVEPGVHITFVSLPNGGNDLKRIRFSREMFNKWQAQRWWGENYDRIMELYNVQRFNRQALNTPPRSEDEPRDSTYTRLTSAQESPMASNKDWTPRSHYKPSGSRGYYPSEPLDHGGGGGHFHAGPSMEPARDTTASRDEPSISNASEMEAEWVEQDEPGVYITIRQLADGTRELRRVRFSRERFGEVNAKTWWEENRERIQAQYL 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03007 333 PANTHER PROTEIN BREVIS RADIX-LIKE 1 22 333 IPR044532 -
Viun3g03007 333 Pfam Transcription factor regulating root and shoot growth via Pin3 277 332 IPR013591 -
Viun3g03007 333 Pfam Transcription factor regulating root and shoot growth via Pin3 124 178 IPR013591 -
Viun3g03007 333 Pfam Transcription factor BRX N-terminal domain 22 39 IPR027988 -
Viun3g03007 333 ProSiteProfiles BRX domain profile. 278 333 IPR013591 -
Viun3g03007 333 MobiDBLite consensus disorder prediction 188 279 - -
Viun3g03007 333 ProSiteProfiles BRX domain profile. 124 179 IPR013591 -
Viun3g03007 333 MobiDBLite consensus disorder prediction 203 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03007 Viun-Chr3 36486902 36491399 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g03007 18 333 Major Intrinsic Protein MIP AT1G31880 68.923 4.37e-154 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03007 - - gmx:100785003 622.083