Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02992 ATGGCAGCAGTGTCAGGGGGTGAGATTTGGAAGGCCCACACGGCCATGGCAATGGTGCAGTTATTCAACGGAGGCTATCACGTCATCACCAAAGTCGCCCTTAACGTTGGCATCAACCAAATCGTGTTCTGCGTCTTCCGCGATATCATTGCCCTCGCCATTCTCGCTCCCCTAGCTTTTATCCGTGAAAAGCATACACGGCCACCAATAACTAAACGCCTTCTCATGTCATTCTTCTTTCTTGGATTAACTGGGATATTTGGCAACCATCTTTTGTTTCTTATTGGCTTAAGCTATACTAATCCAACTTATGCTGCTGCGGTTCAGCCAGCCACTCCGGTCTTTACTTTTCTATTGGCTGTGATGATGGGTACAGAAAGAGTGAACTTGCTAAGATATGAAGGTTTGGCCAAGGTTGGAGGAACTTTCTCCTGTGTTTTAGGTGCTGTTCTGATGGTATTGTATCGTGGTCCGGCATTGATAGGATATTCAGAAACAGACTTTGTAACACACAGTGAAATAAGTGCCAAAGGTCAACCAGAGCCTTCTGGATGGTTAATTGGTGGTTTACTGGATCTCGGAGTTGATCAATTTCATCTCGGAGTTTTGTGCTTCATAGGGAATTGCATGTGCATGGCTGCTTTTCTAACCATTCAGGCTCCACTATTAAAAAAGTATCCTGCAAACCTGTCTGTCACCGCTTATTCATACTTCTTTGGAGCTGTTTTGATGGTAACTACATCATTCTTTGCAACTAACGAGTCAACTGACTGGAGATTGACACAGTCTGAAACTATTGCTGTTATTTATGCAGGATTTATCGCATCTGCCCTTAATTATGGACTGATAACATGGTGCAACAAGATATTGGGGCCAGCCATGGTTGCTCTTTATAACCCACTTCAACCAGGAGCTTCTGCTCTCCTATCCAGAATTTTTCTTGGAAGTCCTATTTACATGGGAAGCATTGTAGGGGGATCTTTGATCATTATTGGTTTGTATGCGGTTACTTGGGCGTCTTACAGAGAAAGACACGCAGCTGCTGCACTTATTTCTCCTGATAAGAATTCTTTTAGAGTTAACATTTTTTCAGGTCCCTCCACCATCTCCCCTAAGTCTTCAGATTAA 1128 0.4353 MAAVSGGEIWKAHTAMAMVQLFNGGYHVITKVALNVGINQIVFCVFRDIIALAILAPLAFIREKHTRPPITKRLLMSFFFLGLTGIFGNHLLFLIGLSYTNPTYAAAVQPATPVFTFLLAVMMGTERVNLLRYEGLAKVGGTFSCVLGAVLMVLYRGPALIGYSETDFVTHSEISAKGQPEPSGWLIGGLLDLGVDQFHLGVLCFIGNCMCMAAFLTIQAPLLKKYPANLSVTAYSYFFGAVLMVTTSFFATNESTDWRLTQSETIAVIYAGFIASALNYGLITWCNKILGPAMVALYNPLQPGASALLSRIFLGSPIYMGSIVGGSLIIIGLYAVTWASYRERHAAAALISPDKNSFRVNIFSGPSTISPKSSD 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02992 375 PANTHER WAT1-RELATED PROTEIN 14 344 IPR030184 GO:0016020|GO:0022857
Viun3g02992 375 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 137 - -
Viun3g02992 375 SUPERFAMILY Multidrug resistance efflux transporter EmrE 256 343 - -
Viun3g02992 375 Pfam EamA-like transporter family 200 337 IPR000620 GO:0016020
Viun3g02992 375 Pfam EamA-like transporter family 17 136 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02992 Viun-Chr3 36352495 36357597 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g02992 1 271 Nodulin-like Gene Family AT3G45870 67.528 2.74e-124 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g02992 - - gmx:100809051 684.485