Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02990 ATGACAGAACTCAGACCAGACCACAGCAACAGTCACCCTCAGGAAGGACCCCCCAAGATCACGACCGAGACTGTCCTTCCCATACAAACAAACGACCAATCTTTTCTTAAACTCGCCATGTACCCCATAACTTTGAAGTTTGAGGAGTTGGTGTACAAGGTTAAAGTGGAGCAGAAGGGTATGTGTTCGGGGAGCACAGGGAGTTCTAGAGAGAAGACCATACTGAAAGGAGTCACGGGTATGGTTTTTCCGGGAGAAATAATGGCTATGTTGGGGCCTTCTGGGAGTGGCAAAACCACACTTCTCACAGCACTTGGAGGAAGGCTTAGTGGAAAACTTTCTGGAAAGGTCACGTACAACAACCAGCCTTTTTCAGGAGCCATGAAAAGAAGAACAGGTTTTGTGGCTCAGGATGATGTGTTATACCCTCATCTCACTGTCACTGAAACTCTACTCTTCACAGCACTTCTCAGGCTCCCCAACACCTTGACCAAGGAAGAAAAAGTTCAGCATGTAGAGCATGTTATCAGTGAGCTAGGACTTAGCAGGTGCAGGGGTAGCATGATTGGAGGGCCTCTATTCAGAGGGATATCAGGAGGGGAGAGAAAAAGGGTGAGCATAGGCCAAGAAATGTTGATCAATCCAAGCCTGTTGCTGCTGGATGAACCCACTTCTGGTTTGGACTCTACCACAGCACAAAGGATCATAACCACAATCAAACGCTTGGCTAGTGGAGGAAGAACTGTTGTCACCACCATTCATCAACCCTCCAGTCGCCTCTATCACATGTTTGATAAAGTGGTCTTGCTCTCTGAAGGATCCCCCATCTACTATGGCCCAGCTTCAACTGCAATGGCCTACTTTTCTTCTGTTGGTTTTTCCACATCCATGATTGTCAATCCTGCTGACTTGTTGCTTGATCTTGCCAATGGAATTGCTCCGGAGTCCTCCAAGCTTGCAAGTGAACAAAGTGAAAGCCAGGAGGCAGAAAATAAGTTGGTTAGAGAAGCCTTAATCTCTGCTTATGAGAAAAATATAGCTACTAAGCTGAAAGATGAGTTATGCAGCTTGGAAGTGAATAACTACGAAGTCATTAGGAATGGTTCCACAAGAAATCACATAAAACCGGAGCGGTGGTGCACAAGTTGGTGGCATCAGTTCAAAGTGCTGTTGCAAAGGGGGCTGAAGGAGAGAAGGTTTGAAGCCTTCAACAGGCTGAGAATTTTCCAAGTCATAAGTGTCGCTTTCCTTGGAGGACTTCTGTGGTGGCACACCCCAGAATCACACATTGGAGACCGGATAGCCCTGCTGTTTTTCTTCTCTGTCTTCTGGGGATTCTACCCTCTCTACAATGCTGTTTTCACATTTCCACAAGAGAGAAGAATGCTGATCAAGGAACGTTCATCTGGGATGTACCGTCTCTCATCCTACTTTCTAGCAAGAACAGTAGGAGACTTGCCAATAGAGCTTGCACTGCCAACTGCATTTGTGTTCATAATCTATTGGATGGGAGGGCTTAATCCTCATCCAGTGACCTTTCTCCTTTCCCTCCTAGTGGTCCTTTACAGTGTCCTTGTCTCTCAAAGCCTTGGCTTAGCCCTTGGTGCCCTTTTGATGGAGGTCAAACAGGCCACTACATTAGCTTCTGTGACAACCCTTGTGTTCCTCATTGCTGGAGGCTACTATATACAACAGATTCCACCCTTCATAGAGTGGCTCAAGTACCTGAGCTATAGCTATTACTGTTACAAGCTTCTTGTTGGTGTGCAGTACCTGGATGATGATTATTATGAGTGCTCAAAAGGGGTGTTGTGCAAGGTTGGAGAATTTGGTCCAATCAAATCAGTGGGTTTGAATCACTTGTGGGTGGATGTGTCTATAATGGCCATGATGTTGGTAGGTTACAGACTAGTTGCTTATTTAGCACTGCAGAGAGTGAGGTAG 1944 0.4614 MTELRPDHSNSHPQEGPPKITTETVLPIQTNDQSFLKLAMYPITLKFEELVYKVKVEQKGMCSGSTGSSREKTILKGVTGMVFPGEIMAMLGPSGSGKTTLLTALGGRLSGKLSGKVTYNNQPFSGAMKRRTGFVAQDDVLYPHLTVTETLLFTALLRLPNTLTKEEKVQHVEHVISELGLSRCRGSMIGGPLFRGISGGERKRVSIGQEMLINPSLLLLDEPTSGLDSTTAQRIITTIKRLASGGRTVVTTIHQPSSRLYHMFDKVVLLSEGSPIYYGPASTAMAYFSSVGFSTSMIVNPADLLLDLANGIAPESSKLASEQSESQEAENKLVREALISAYEKNIATKLKDELCSLEVNNYEVIRNGSTRNHIKPERWCTSWWHQFKVLLQRGLKERRFEAFNRLRIFQVISVAFLGGLLWWHTPESHIGDRIALLFFFSVFWGFYPLYNAVFTFPQERRMLIKERSSGMYRLSSYFLARTVGDLPIELALPTAFVFIIYWMGGLNPHPVTFLLSLLVVLYSVLVSQSLGLALGALLMEVKQATTLASVTTLVFLIAGGYYIQQIPPFIEWLKYLSYSYYCYKLLVGVQYLDDDYYECSKGVLCKVGEFGPIKSVGLNHLWVDVSIMAMMLVGYRLVAYLALQRVR 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02990 647 ProSitePatterns ABC transporters family signature. 197 211 IPR017871 GO:0005524|GO:0016887
Viun3g02990 647 MobiDBLite consensus disorder prediction 1 21 - -
Viun3g02990 647 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 70 290 IPR027417 -
Viun3g02990 647 CDD ABCG_EPDR 42 279 - -
Viun3g02990 647 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 24 640 - -
Viun3g02990 647 Gene3D - 62 291 IPR027417 -
Viun3g02990 647 Pfam ABC-2 type transporter 254 319 IPR043926 GO:0140359
Viun3g02990 647 Pfam ABC-2 type transporter 386 591 IPR013525 GO:0016020|GO:0140359
Viun3g02990 647 FunFam ABC transporter G family member 22 62 291 - -
Viun3g02990 647 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 45 297 IPR003439 GO:0005524
Viun3g02990 647 SMART AAA_5 84 274 IPR003593 GO:0016887
Viun3g02990 647 Pfam ABC transporter 75 225 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02990 Viun-Chr3 36325224 36328318 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g02990 74 274 Calmodulin-binding Proteins AT2G36910 29.187 6.79e-12 67.0