Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02956 ATGTGTACGGCGGAGAAAGACGGGATCATGCTCTTCGGCGTGCGCCTCACCGTACCCGATAACAACCCCGCCGTTTTCAGAAAGAGTGCCAGCATGAACAATCTCTCCCCAAACTCTGAATCGCCTCCGCCGCACCATCCCAATGCAGGCTACGCCTCAGACGACGTCGTTCACCTCTGCCGTCGCACGCGCAAGCGAGGGGTTCCGTGGACGGAGGAGGAGCACCGGCAGTTCCTGTTGGGATTACAGAACGTCGGGAAAGGTGATTGGAGAGGAATTTCTAGAAACTTCGTCAAGACTCGAACGCCCACTCAGATCGCTAGTCACGCTCAAAAGTATTTTCTCCGCCGTCACACTCACAATCGCCGCCGCCGGAGATCTAGTCTCTTCGATATCACCACCAACTCGGTGAAGGAAGAGGAACGAGCGGTGCCGTCGGCTAGGTCGAAACCGGTTTTGCCGACACCTCCGTCTTTGAGAATGGCTGAGTTGGACTTGAGTGGGAGGTCGCTGTCGCTGAAGCTGAGGCTGCCGGAGTCGGAGGAGCCGTCGGCGGTGACTTTTGAGGCTGTGTCTAGTGGGAAATTGAGCGGTGACGTGGACATGATTCGTGTTGCTTGA 621 0.5684 MCTAEKDGIMLFGVRLTVPDNNPAVFRKSASMNNLSPNSESPPPHHPNAGYASDDVVHLCRRTRKRGVPWTEEEHRQFLLGLQNVGKGDWRGISRNFVKTRTPTQIASHAQKYFLRRHTHNRRRRRSSLFDITTNSVKEEERAVPSARSKPVLPTPPSLRMAELDLSGRSLSLKLRLPESEEPSAVTFEAVSSGKLSGDVDMIRVA 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02956 206 NCBIfam myb-like DNA-binding domain, SHAQKYF class 65 116 IPR006447 GO:0003677
Viun3g02956 206 SMART sant 66 116 IPR001005 -
Viun3g02956 206 ProSiteProfiles Myb-like domain profile. 62 114 IPR001005 -
Viun3g02956 206 MobiDBLite consensus disorder prediction 137 156 - -
Viun3g02956 206 ProSiteProfiles SANT domain profile. 65 118 IPR017884 -
Viun3g02956 206 SUPERFAMILY Homeodomain-like 63 117 IPR009057 -
Viun3g02956 206 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 118 IPR017930 -
Viun3g02956 206 Gene3D - 68 119 - -
Viun3g02956 206 FunFam transcription factor MYB1R1 68 119 - -
Viun3g02956 206 MobiDBLite consensus disorder prediction 28 52 - -
Viun3g02956 206 Pfam Myb-like DNA-binding domain 69 114 IPR001005 -
Viun3g02956 206 CDD SANT 69 114 IPR001005 -
Viun3g02956 206 PANTHER TRANSCRIPTION FACTOR KUA1 5 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02956 Viun-Chr3 35899294 35900466 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Viun3g02956 Myb_DNA-binding 1.6e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g02956 - - gmx:778091 259.996