Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02938 ATGGGTGCAGGGGACTACTACAAGATCCTCAAGGTGAACCGCAATGCCTCGGACGAAGAACTCAAGAGGGCATATAAGAGGTTGGCCATGAAGTGGCACCCAGATAAGAACCATCAGCACCACCCTGTTACGAAAGAAGAAGCTGAGGCCAAGTTCAAGCAGGTTTCGGAGGCTTATGATGTTCTCAGCGATCCCAAGAAGCGCCAGATCTATGATTTTTATGGCCACTATCCCTTGAACTCTATGAAGATGAAGGAGGAGAAGGGTGATGGGGGTGTTAGGGTCCCCAAAAATGAGAAAGTTGGGGTGGTTGAGAGAAAATTGGTATGCACCCTCGAGGAACTTTACAAAGGTTGCAGAAAGAAGTTGAAGATCTCAAGGACTGTACATCATGAATTCGGTAAGTTGGAGACTGTGGAAGAGATTTTGAAAATAGATATCAAACCTGGTTGGAAGAAAGGCACAAAAATAACATTTCCTGGGAAAGGAAACCAAGAAGCAGAAGCTAGTGCTGCTGATGATCTAATCTTTGTGGTGGATGAGAAACCACATGCTTTATTCAAGAGGGATGGAAATGATTTGGTTGTGACACAAAAAATCTTACTTGTAGAGGCTCTTGTGGGAAAGACTCTCAACTTAACAACCTTGGATGGAAGAGAGCTCACAATTCAAGTGACTGATGTGAAACCAAAATTTGTGTTGGTGGTCCCAAATGAAGGAATGCCCATCTCAAAGGAACTTGGAAAGAAAGGAAACTTGAGAATCAAGTTTGATGTTATGTTCCCATCAAGGCTTACCACACAACAGAAGTATGAGCTGAAAAGGATTTTGAGCAACACTGATGACTAG 849 0.4335 MGAGDYYKILKVNRNASDEELKRAYKRLAMKWHPDKNHQHHPVTKEEAEAKFKQVSEAYDVLSDPKKRQIYDFYGHYPLNSMKMKEEKGDGGVRVPKNEKVGVVERKLVCTLEELYKGCRKKLKISRTVHHEFGKLETVEEILKIDIKPGWKKGTKITFPGKGNQEAEASAADDLIFVVDEKPHALFKRDGNDLVVTQKILLVEALVGKTLNLTTLDGRELTIQVTDVKPKFVLVVPNEGMPISKELGKKGNLRIKFDVMFPSRLTTQQKYELKRILSNTDD 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02938 282 FunFam DnaJ-like subfamily B member 13 2 97 - -
Viun3g02938 282 SMART dnaj_3 4 67 IPR001623 -
Viun3g02938 282 FunFam Dnaj homolog subfamily b member 100 182 - -
Viun3g02938 282 Gene3D - 102 182 - -
Viun3g02938 282 CDD DnaJ 5 64 IPR001623 -
Viun3g02938 282 SUPERFAMILY HSP40/DnaJ peptide-binding domain 187 270 IPR008971 GO:0006457|GO:0051082
Viun3g02938 282 ProSitePatterns Nt-dnaJ domain signature. 52 71 IPR018253 -
Viun3g02938 282 SUPERFAMILY Chaperone J-domain 4 80 IPR036869 -
Viun3g02938 282 Gene3D - 184 263 - -
Viun3g02938 282 SUPERFAMILY HSP40/DnaJ peptide-binding domain 106 184 IPR008971 GO:0006457|GO:0051082
Viun3g02938 282 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 277 - -
Viun3g02938 282 FunFam DnaJ subfamily B member 13 184 263 - -
Viun3g02938 282 Pfam DnaJ domain 5 72 IPR001623 -
Viun3g02938 282 CDD DnaJ_C 104 265 - -
Viun3g02938 282 Pfam DnaJ C terminal domain 105 262 IPR002939 -
Viun3g02938 282 PRINTS DnaJ domain signature 25 40 IPR001623 -
Viun3g02938 282 PRINTS DnaJ domain signature 47 67 IPR001623 -
Viun3g02938 282 PRINTS DnaJ domain signature 7 25 IPR001623 -
Viun3g02938 282 PRINTS DnaJ domain signature 67 86 IPR001623 -
Viun3g02938 282 ProSiteProfiles dnaJ domain profile. 5 75 IPR001623 -
Viun3g02938 282 Gene3D DnaJ domain 2 93 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02938 Viun-Chr3 35600671 35603092 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g02938 6 74 C2H2 Transcription Factor Family AT1G74250 39.130 1.37e-11 62.8